KEGG   Lactuca sativa (garden lettuce): 111899471
Entry
111899471         CDS       T05352                                 
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv00040  Pentose and glucuronate interconversions
lsv01100  Metabolic pathways
Module
lsv_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    111899471
Enzymes [BR:lsv01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     111899471
SSDB
Motif
Pfam: Glyco_hydro_28 Pectate_lyase_3 NosD
Other DBs
NCBI-GeneID: 111899471
NCBI-ProteinID: XP_023751091
Position
1:98739926..98741320
AA seq 412 aa
MIMAMRVDYNIIITSAIIVAAASIISSTTAATTVPGLINIVNLGAIADGKTDSTLPFQSA
WASACSSSKPVTIYVPSGRFFIRSAYFQGERCSNKAINFRIDGTLLAPTDYGKSSSDVWI
KFEKATGVSISGGTLDGRGTNLWACKASSSSCPTGANTLGFYNSRDIIINGLSSINSQKF
HIVMNGCQNVKLQGITISAPGNSPNTDGIHIEFSTGVTVLSSRIATGDDCVSIGPGSSNL
WIQSITCGPGHGVSIGSLGWSAQEAGVQNVTLKTATFKSTQNGVRIKTWARESNGFVKGV
VFQDLTMVQVQNPVIIDQNYCPGEHNCPHQLSGVAISDVIYEDIRGTSATDVGVKLDCSK
EHPCSGIKMEDVNLSYDNRPAQVSCTNALGTTGGGGGAAAVIHDTTSSSCLM
NT seq 1239 nt   +upstreamnt  +downstreamnt
atgataatggcgatgagggttgattacaacatcatcatcacttccgccattattgtagct
gctgcttctatcatcagttcaacaaccgcagcaacaacagttccaggactcataaacatc
gtcaatttgggagccatagccgacggaaaaacagactcaaccctaccatttcaatctgca
tgggcttctgcatgttcgtcatctaaaccagtcactatctacgtcccctccggcaggttt
ttcatccgatctgcttatttccaaggcgaacgctgtagtaacaaagcaatcaacttccgt
attgatggcacccttcttgctccgacagactacgggaaatcctctagtgatgtctggatt
aagtttgaaaaggccaccggagtttcgatctccggtggaactttagatggtcggggaacc
aatctctgggcttgcaaagcctcttccagttcttgtcccaccggagcaaacacgttaggg
ttctataattcaagagacatcataatcaatggattgagctccataaacagccaaaagttc
cacatcgtgatgaacggatgccaaaacgttaaacttcaaggaatcacgatatctgctccg
ggaaacagtcccaacaccgacggcatacacattgaattctccaccggagtcactgttctc
agctcccgaattgccaccggagacgattgtgtatccatcggaccaggttcatctaacctc
tggatacaaagcatcacctgtggccctggccatggtgtcagcatcggcagtttagggtgg
agtgcacaggaggccggagtccagaacgtgacgttgaagacggcgacatttaagtcaacg
cagaatggggttaggatcaagacatgggctagggaaagtaatgggttcgtaaagggggtt
gtgtttcaagatttaacgatggtgcaggttcaaaatccggtgataatcgatcagaactat
tgtccaggtgagcacaattgtcctcatcagttgtccggcgtcgccatttcggatgttata
tacgaagatattcgtggcacatcagcgacagatgttggggtgaaactggattgcagcaag
gagcatccatgcagtgggataaaaatggaggatgtgaacttgagttatgataaccgacct
gctcaagtttcatgcaccaatgctcttggaaccaccggtggtggtggtggcgctgccgca
gtaatccacgatacaacctctagttcctgtttaatgtaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (3)   
   Pfam (3)   
All databases (22)   

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