KEGG   Lactuca sativa (garden lettuce): 111904159
Entry
111904159         CDS       T05352                                 
Name
(RefSeq) uncharacterized protein LOC111904159
  KO
K14574  ribosome maturation protein SDO1
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    111904159
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lsv03009]
    111904159
Ribosome biogenesis [BR:lsv03009]
 Eukaryotic type
  Pre-60S particles
   Export and cytoplasmic maturation factors
    111904159
SSDB
Motif
Pfam: SBDS SBDS_domain_II SBDS_C zf-C2H2_jaz DUF3849
Other DBs
NCBI-GeneID: 111904159
NCBI-ProteinID: XP_023755708
Position
1:12220879..12222848
AA seq 367 aa
MSRSIVQPVGQKRLTNVAAVRLKKHGNRFEIACYKNKVLSWRSGVEKDLDEVLQSHTVYS
NVVKGVLAKSKDLKAAFGMDDQTKICLEILEKGELQVAGKERESQLSNQFRDIATIVMQK
TINPETQRPYTISMIERLMHEIHFAVDSHSSSKKQALDVIKELQKHFPIKRSPMRLRLTL
PQENFNSLSEKLKEWKTVIVSKEASGIQLSIVCEMDPGLFRDCDAFLRNLQGRSEILAVS
VHGEGDINTDDYEGHEEVSVSISSTSTSTEPKKLPEPVAQLTEKMEKQKLAPKTEITEGE
VKVKQSKCSTCDASVGDTKQYREHFKSDWHKHNLKRKTRQLPPLSAEECAADEEINDSLG
DLKEYSF
NT seq 1104 nt   +upstreamnt  +downstreamnt
atgtctcgatcaattgtgcagccggtaggccagaaaagactcacgaacgtagccgccgtt
cgtctcaagaaacatggaaaccgatttgagatcgcttgttataagaacaaagtcctctca
tggcgctccggcgttgagaaagatttggatgaagtattgcaatcacacaccgtctactca
aatgttgttaaaggagttcttgcaaagtcaaaagatctaaaggctgcttttgggatggat
gatcagactaaaatctgtctggagattttggagaaaggagaactgcaagttgcaggaaaa
gagagagaatcacaattgtcaaatcaatttagggacattgcaactattgtaatgcagaaa
actataaaccctgaaactcaacgcccgtatactataagcatgattgagcgtttgatgcat
gagattcattttgctgtagattcacatagcagttcaaagaaacaggcattagatgtgatc
aaggaacttcaaaaacatttcccaataaagagatcccccatgagactaaggctaacatta
cctcaagaaaacttcaactccctttcagaaaaactgaaggaatggaaaactgtcattgtt
tctaaagaagcttctggaattcaactctctattgtatgtgaaatggacccgggattattc
cgggattgtgacgcgttcttgaggaatcttcaagggaggtctgaaattctggcagtttca
gtgcatggtgaaggtgatatcaatacagatgattatgaaggtcatgaggaggtatcagta
tccatatcatcaacatcaacatcaactgaaccaaagaagctgcccgaacctgttgcccag
ctgaccgagaaaatggagaagcaaaagttggctccaaaaaccgaaatcacagaaggtgag
gtaaaggtaaagcagagtaaatgcagtacatgtgatgcgagtgtgggggatacaaaacag
tatagagaacatttcaagagtgattggcataaacataatttgaagaggaaaacaagacag
ttgcctccactttcggctgaagaatgtgctgctgatgaggaaattaatgactcattgggt
gatctgaaagaatattcgttttga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (5)   
   Pfam (5)   
All databases (17)   

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