KEGG   Lactuca sativa (garden lettuce): 111917504
Entry
111917504         CDS       T05352                                 
Name
(RefSeq) DNA polymerase II subunit B4
  KO
K02326  DNA polymerase epsilon subunit 3 [EC:2.7.7.7]
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03030  DNA replication
lsv03082  ATP-dependent chromatin remodeling
lsv03410  Base excision repair
lsv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    111917504
   03410 Base excision repair
    111917504
   03420 Nucleotide excision repair
    111917504
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    111917504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lsv03032]
    111917504
   03036 Chromosome and associated proteins [BR:lsv03036]
    111917504
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111917504
Enzymes [BR:lsv01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     111917504
DNA replication proteins [BR:lsv03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    111917504
Chromosome and associated proteins [BR:lsv03036]
 Eukaryotic type
  Chromatin remodeling factors
   CHRAC complex
    111917504
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      111917504
SSDB
Motif
Pfam: CBFD_NFYB_HMF Histone CENP-T_C AP3D1
Other DBs
NCBI-GeneID: 111917504
NCBI-ProteinID: XP_023768952
Position
2:complement(140765699..140767053)
AA seq 155 aa
MATATTATVVEKVVADAEELPKAIVKRLVKDKLSQLSQDGGEIQVLKDSLLAFSESSRIF
IHYLSATANDICKESKRQTISAEDVFKALEEIEFPEFIASLRTSLEEFKQKNAKRKSDTS
KSKEAKKTKTEESPMENGKAEETEAEDVNVVVNGE
NT seq 468 nt   +upstreamnt  +downstreamnt
atggcgacggccacgacagcaacggtggtggagaaagttgttgcagatgcggaggagctg
ccgaaggcgatagtgaagagactagtaaaggataaactgtctcaattatctcaagacggg
ggtgaaattcaagtcttaaaggattctctcttagccttctccgaaagctctcgaattttc
atccattacctttccgctacggcaaatgacatatgcaaggaatccaagaggcaaacaatc
agtgctgaagatgtattcaaggctcttgaagagatagagtttccagagttcattgcatct
ctaagaacctcccttgaagaattcaagcagaagaatgcgaaaaggaagtcagacacatca
aagtcaaaggaagccaaaaagactaaaacagaagagtctccaatggagaatggaaaagca
gaggaaactgaagctgaagatgtgaatgttgttgtcaatggggagtga

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (4)   
   Pfam (4)   
All databases (23)   

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