KEGG   Lactuca sativa (garden lettuce): 111918586
Entry
111918586         CDS       T05352                                 
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 6A
  KO
K03014  DNA-directed RNA polymerases I, II, and III subunit RPABC2
Organism
lsv  Lactuca sativa (garden lettuce)
Pathway
lsv03020  RNA polymerase
lsv03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:lsv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111918586
  09124 Replication and repair
   03420 Nucleotide excision repair
    111918586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lsv03021]
    111918586
   03400 DNA repair and recombination proteins [BR:lsv03400]
    111918586
Transcription machinery [BR:lsv03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol I, II, III common subunits
     111918586
  RNA polymerase III system
   RNA polymerase III
     111918586
  RNA polymerase I system
   RNA polymerase I
     111918586
DNA repair and recombination proteins [BR:lsv03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111918586
SSDB
Motif
Pfam: RNA_pol_Rpb6
Other DBs
NCBI-GeneID: 111918586
NCBI-ProteinID: XP_023769998
Position
3:complement(90832570..90834298)
AA seq 145 aa
MADEDYEMDGAYDDEPLEPEPEEGAEEEDGEGENKDDELPDPLLADNEDKEDQEQVDRPR
KTSKYMTKYERARILGTRALQISMNAPVMVELEGETDPLEIAMKELREKKIPFTIRRHLP
DGSYEEWGVDELIVEDSWKRQVGGD
NT seq 438 nt   +upstreamnt  +downstreamnt
atggcggatgaagattatgagatggacggagcatatgatgatgagccattggaacctgag
cctgaagaaggagcagaagaagaagatggtgaaggagagaataaagacgatgaattgcca
gatcctcttttagctgacaatgaagacaaagaagatcaagaacaagttgatcgacctcgc
aaaacatcaaaatatatgacaaagtatgaaagagcaagaatcttgggaacacgtgctctt
caaatcagcatgaatgctcctgtaatggttgaattggagggtgagactgacccccttgag
attgcaatgaaggagcttcgtgagaaaaagatacctttcaccattcgtagacacctgcca
gatggaagttatgaagagtggggagtggatgagttgattgtggaagactcttggaagaga
caagttggtggtgactaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (1)   
   Pfam (1)   
All databases (15)   

Download RDF
DBGET integrated database retrieval system