KEGG   Lachancea thermotolerans: KLTH0A00638g
Entry
KLTH0A00638g      CDS       T01117                                 
Name
(RefSeq) KLTH0A00638p
  KO
K12600  superkiller protein 3
Organism
lth  Lachancea thermotolerans
Pathway
lth03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lth00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    KLTH0A00638g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lth03019]
    KLTH0A00638g
Messenger RNA biogenesis [BR:lth03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     KLTH0A00638g
SSDB
Motif
Pfam: TPR_22 TPR_19 TPR_2 TPR_16 TPR_14 TPR_1 TPR_8 TPR_11 TPR_17 TPR_12 TPR_6 TPR_9 TPR_7 ANAPC3 Coatomer_E TPR_10 HrpB1_HrpK DUF1450 COG4_N Chlorophyllase
Other DBs
NCBI-GeneID: 8290281
NCBI-ProteinID: XP_002551490
UniProt: C5DB91
Position
A:complement(63363..67598)
AA seq 1411 aa
MAELKQLLKDAKNALASEDYEQSIEKSKEVLNLDKNNYFAHVFLGKAFSCTGDLAQSKKH
YKAAIDMDPGNMLAWKGIFMLFRTANIAPTIVSFDEFFDLCGEYAEHLVQQQLPMVDLVN
DIRNFKNFYRDCQESYLRHMRPGTPMAERLSRHLITPQDALQGLLNIVSAEEQQQVSKLV
SRERLKISANQPDYNLKVNSIAWQVYQDSEIDELYQQLINITDDDEKRRGLESKWLEYRI
RVLKSMPADIKHHFFTKVRNMVEDMVVVDHDFLLAWQLYFEWQDYSDLDCMDVNVISKFL
KKFPKEPLAAVLYAWVCSEQSSYNSKEFYEKTFQGEDTDNSGTSSVDSINDVVEDGMDES
EKRRLQQLVDPSMEEATFGLSEDEVLLSLTENIKKTQQSIVAHRIVSHYYVSTREYESAL
HYTKAGIVLCAQSVKNMGAHLSNSKRELTLDLATTYTYFEAPKNHPTALALFEKLLTENS
DNVHAKMGKGLIAIERRNWQEAYELLKEVTERYPDNYEVLSEFAWSELHLDAPDAAIERF
KYILNNVEGSDLKVLEFRSLNHWRMAKGYVYKQHGEINAGESSEKEYIKLAFKQLVQAVK
TSENFAPGYSTLGDIYSEYYQDPTRAFKCYFKSFEMDPSDLTAARYMCEKYCGSCDWQSA
SLIAERVVKAEKSKSILQNVNWPYRVLGIAHLEKQAESESIEWFQSALRVEPADLESWLG
LGQAYYSCGRVEASVKVFEKALEVSPGNAYAHYFKALSLSKMGLYDESIEIFRELTAEHP
DEESYQVSMVEVLVEHCNVLCSQGFLTRSVAAAADAIRKIESIVLHIDYKIHGMWLSLSN
ALRVICLVQSQVHLLPLESLVNIFEVAELRNTDEIDKIDHVTLSGLLSDLEQDNVAIAAQ
FLVLSGKHAIACSDYASLPRTVRASLWYNLGIVELMAFVILKSNSHRDAAIESFKKSIEY
QSNTAEAWIGFGIASIDLNVRVAQHCFIKATALNPRETSVWYDMAILALRYNDVAFARAV
LMKSQSIAPQDSTPWFGLALASEKEGLTQDSARLFAHSFVLSNGKSKGAQLLYAKSVLKT
RIGSGDDERDIGPGQELSAVAYGLDDYLKKNPDDKFALQCAILTLERLRNYAAARKLSDR
LLDILEKRFEKAQDDSELFHFAIVKSQLARVYLGLKDYETAIESADLSLGILAEHNNEVA
EKCITSNHAVMGLASFFLDDFDQTLEHFKVLLDRPGESKQLVILVAKILYNVESEETREV
ALKELVDYINSNGPDLTVTLTIAVISLLEGIPDDMRAILSELKSLPLSDMISDRHRDIPF
LIQQLNTKLSQDCESQQQWQRTAFFFPNDSGSWGSLDKKIRARIAAGGQNKVPARKMSEF
YSSLGNLSKIQRSIFLCPWNKEALSSLKGCF
NT seq 4236 nt   +upstreamnt  +downstreamnt
atggcagaactaaagcagctgttaaaggatgccaagaatgcactagctagcgaggactat
gaacagtctattgagaagtcgaaagaggttctaaatcttgataaaaacaattattttgct
catgtctttcttggaaaggcattttcgtgcaccggcgacttggcgcagtctaagaagcac
tacaaggccgccattgatatggaccccggaaatatgttggcatggaaggggattttcatg
ctctttagaacagccaacattgctcccacgattgtgtcgtttgatgagttttttgactta
tgtggagaatacgccgaacaccttgtccagcagcagctgcccatggtggatctggttaac
gacatcaggaacttcaaaaacttttacagagactgtcaggaatcatatttaagacacatg
cgcccagggacaccaatggcggagcgcttgtcgcggcacctgataaccccacaggatgcc
cttcaaggtctactcaacatagtctcggccgaagagcagcaacaagtgtccaaactcgtc
agtcgggaaaggctcaaaataagtgctaaccagcctgattacaacttaaaagtaaattcc
atcgcgtggcaagtttatcaagactcagagatcgacgagctctatcaacagctcattaac
ataacagatgacgacgagaaaaggcggggtcttgagtctaaatggctagagtacagaata
agggtgcttaagtcgatgcctgcggatataaagcatcatttctttacaaaagtcaggaat
atggtcgaagatatggtggtggttgaccatgacttcctgcttgcgtggcagctttacttt
gaatggcaggactattcggacctagactgtatggacgtgaacgtcatttcaaagtttctc
aagaagtttcctaaggagcctttggcggcagtactttatgcctgggtttgttcagaacaa
tcaagttacaactctaaggagttttatgaaaagactttccaaggtgaggataccgacaat
tcgggtacttcctcagttgatagcataaacgacgtggtcgaagatggcatggacgaatct
gaaaagcgtaggctccagcagttagtggatccatcgatggaggaagcaacattcggtctg
tcggaagacgaagtccttctctcgcttactgaaaatatcaaaaagacccaacaaagtata
gtcgcgcaccgcatcgtctctcattattacgtatcaacgagggaatatgaatcagcttta
cactacactaaggcaggtattgtactttgcgcacaaagtgtcaaaaacatgggtgcacac
ctaagcaactctaaaagagaattgactttagatctggcgactacatatacctactttgaa
gcgccgaaaaaccacccaactgccctagccttgtttgaaaagcttctcacagaaaattcg
gacaatgtgcacgcaaaaatgggaaaaggtctgatagcaatcgaacgcaggaactggcaa
gaagcgtatgagcttctcaaagaggtaactgaaagatatccggacaattacgaagttctc
tcagaatttgcatggagtgagcttcatttggatgccccagatgcagccattgaaaggttc
aaatatatcctgaacaacgtcgaaggttctgacttgaaggtactcgagttcagatcattg
aaccactggagaatggcgaaaggttatgtctacaaacagcacggggaaattaatgccgga
gagagctctgaaaaagaatatatcaagcttgcatttaaacagctagttcaagccgtcaaa
acgtctgagaattttgcgcctggttattcgacattgggtgatatatattccgaatactat
caagatccgaccagagccttcaagtgttacttcaaatctttcgagatggatcctagtgat
ttgactgccgctaggtacatgtgcgaaaagtactgtggttcctgtgattggcaatctgcg
tcactgatagcggaacgtgttgtaaaagcagagaagtctaaaagcattctacaaaacgtc
aattggccttatcgcgttttaggtattgcacacctcgaaaaacaagccgaatcagagtct
attgaatggttccaatctgcgctacgtgttgagcctgctgatttggagtcttggcttggt
ctcggtcaggcatattatagctgtgggagggtggaggcatcagtcaaggtctttgagaag
gcccttgaagttagccccggcaatgcgtacgcccactacttcaaagccctttcattgtca
aagatggggctctatgatgagagcattgaaattttccgagagctcacagctgagcacccc
gacgaggaaagctaccaggtttccatggttgaagtcctggttgagcactgtaatgtgctt
tgttctcaaggctttttgacaagatcggttgctgctgctgccgatgctattcgcaagata
gagtctattgttttgcatattgactacaaaattcatggcatgtggctatcgctctccaac
gcgctcagggtgatttgtttggtacaatcacaggttcatttgttacctttggaaagcttg
gtaaatatttttgaggtggcagaacttcgcaatactgatgaaatcgataaaatagatcat
gtcacgctttcggggctgttgtccgacctcgaacaagacaacgttgcaattgctgcgcaa
ttccttgtcttgtccggcaaacatgccatcgcatgctccgactacgcttcgttgccccgg
accgtaagagcctccttgtggtacaacctaggaatagttgaactaatggcgtttgtgata
ctgaagtcaaactcccatcgggatgccgcgattgaaagtttcaagaagtcaattgagtat
caatccaacacggcagaggcttggattggttttggaatagcttctattgacctaaacgtc
agagttgcgcagcactgttttatcaaagccacagcgctgaatccgagggaaacgagtgta
tggtacgatatggctattctagccttaagatacaacgatgttgctttcgcacgtgccgtt
ttgatgaagtctcaaagcattgcgccacaagactctactccgtggtttggccttgctctt
gcgtccgagaaagaaggcttgacacaagacagtgcgcgactatttgcacattcatttgtt
ctgtcaaacgggaagtcaaaaggtgcccaattattgtacgctaagagcgtgttgaaaaca
agaattggaagcggtgatgatgagagggatataggacctggtcaggagctgagcgctgta
gcttatggcttagatgattatttgaaaaagaacccagatgacaaatttgccctacaatgc
gctatactcactcttgagagactacgcaattatgcagcggcgcgtaaactttctgaccgc
cttctggacatacttgagaaacggttcgaaaaggcacaagatgattccgagttgtttcat
tttgccattgtgaagtcgcaacttgctcgtgtctatcttggtctaaaagattacgagacg
gcaatcgaaagtgcagacttatcgttgggtattcttgccgagcacaacaacgaggtagcg
gagaagtgtattacctcaaaccatgccgtgatgggactagcttcttttttcctggatgac
ttcgatcagactctagaacacttcaaagtcttgcttgaccgcccaggggaatcaaagcaa
ctagtgatattggttgctaagattctctacaacgttgagtcagaagagactcgcgaagtt
gccctcaaggaattggtggattatattaactccaacggtccagacctgactgttacgctc
acaatcgcagtgatttcgctcttggagggtattccagatgacatgcgcgctatcttgtcg
gaactgaagagcctgcccttgagtgatatgatatctgacagacaccgcgacattccattt
ttgatccagcagctcaatacaaagctttcccaagactgcgaaagtcagcagcaatggcaa
agaactgcgtttttctttccaaatgacagtggatcctggggctcactggacaagaagata
agagcacgtatcgcagctggcggacagaataaggtccctgccaggaagatgagcgagttc
tatagcagtttagggaacttgtccaaaattcaaaggtcaatcttcctctgtccttggaac
aaggaagcactctctagcttgaaagggtgcttttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (20)   
   Pfam (20)   
All databases (31)   

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