KEGG   Lysobacter oculi: DCD74_05940
Entry
DCD74_05940       CDS       T05527                                 
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
  KO
K06176  tRNA pseudouridine13 synthase [EC:5.4.99.27]
Organism
lue  Lysobacter oculi
Brite
KEGG Orthology (KO) [BR:lue00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lue03016]
    DCD74_05940
Enzymes [BR:lue01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.27  tRNA pseudouridine13 synthase
     DCD74_05940
Transfer RNA biogenesis [BR:lue03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    DCD74_05940
 Prokaryotic type
    DCD74_05940
SSDB
Motif
Pfam: TruD
Other DBs
NCBI-ProteinID: AXA84294
UniProt: A0A344J5I4
Position
complement(1231787..1232818)
AA seq 343 aa
MSESIAEQPRAHGAPLIRARARVAPEDFRVDEIDAFDASGAGEHLLLTIEKRGMNTAFAA
RRIAQWAGVAESAIGYAGLKDRHAVTRQRFSVWLPKKIAPDIDTLASDDLKVIASAWHSR
KLPRGALAGNRFVLALREVEGDRDGVDARLQAIAARGVPNYFGEQRFGHGGGNVAQALAM
FAGKRVRREERSLLLSAARSEIFNAALAQRVARGDWDVATEGDVFMLDGSQSVFGPVEID
DAIGARIAGFDIHPTGPMWGRGEPRTAGAIHALETGIAQSHQALCDGLEAAGMKQERRSL
RLPVRGLEWQWLADGALQLSFALPPGAYATVVMRELGEIANAA
NT seq 1032 nt   +upstreamnt  +downstreamnt
atgagcgagtcgatcgccgaacagccgcgcgcacatggcgcgccgctgatccgcgcacgc
gcacgggtggcgccggaggatttccgcgttgacgagatcgacgccttcgacgccagcggc
gccggcgaacacctgctgctgaccatcgagaagcgcggcatgaacaccgcgttcgcggcg
cggcgcatcgcgcagtgggcaggcgtggcggaatcggccatcggctacgcggggctgaag
gatcgccatgcggtgacccgccagcgcttctcggtctggttgccgaagaagatcgcgccc
gacatcgacacacttgcctctgacgacctcaaggtcatcgcctcggcttggcacagccgc
aagctgccgcgtggcgcgctggccggcaaccggtttgtgctggcgttgcgcgaggtcgaa
ggcgaccgtgacggtgtggacgcacgcctgcaggccatcgccgcgcgtggcgtgcccaac
tatttcggcgagcagcgtttcggccacggcggcggcaatgtcgctcaggcgctggcgatg
ttcgccggcaagcgcgtgcgccgcgaggagcgctcgctgctgctctccgccgcccgttcg
gaaatcttcaatgcggcgctggcgcaacgcgtggcgcgtggggactgggatgtcgcgacc
gaaggcgacgtcttcatgctcgacggcagccagagcgtattcgggccggtggagatcgat
gacgccatcggcgcgcgcatcgccggcttcgacatccacccgaccgggccgatgtggggg
cgtggagaaccgcgcacggcgggcgcgatccacgcgctggagaccggcatcgcccaatcc
catcaagcgctgtgcgacgggctggaggccgccggcatgaagcaggaacgccgcagcctg
cgcctgccggtgcgcggcctggaatggcagtggctggccgacggcgcgttgcagctgtcg
ttcgcgctgccgcccggtgcctacgccacggtggtgatgcgcgagctgggcgaaatcgcc
aacgcggcctga

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Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (10)   

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