KEGG   Limosilactobacillus vaginalis: LV515_08050
Entry
LV515_08050       CDS       T06850                                 
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
  KO
K00600  glycine hydroxymethyltransferase [EC:2.1.2.1]
Organism
lva  Limosilactobacillus vaginalis
Pathway
lva00260  Glycine, serine and threonine metabolism
lva00460  Cyanoamino acid metabolism
lva00630  Glyoxylate and dicarboxylate metabolism
lva00670  One carbon pool by folate
lva00680  Methane metabolism
lva01100  Metabolic pathways
lva01110  Biosynthesis of secondary metabolites
lva01120  Microbial metabolism in diverse environments
lva01200  Carbon metabolism
lva01230  Biosynthesis of amino acids
lva01240  Biosynthesis of cofactors
Module
lva_M00140  C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:lva00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00630 Glyoxylate and dicarboxylate metabolism
    LV515_08050
  09102 Energy metabolism
   00680 Methane metabolism
    LV515_08050
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    LV515_08050
  09106 Metabolism of other amino acids
   00460 Cyanoamino acid metabolism
    LV515_08050
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    LV515_08050
Enzymes [BR:lva01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.2  Hydroxymethyl-, formyl- and related transferases
    2.1.2.1  glycine hydroxymethyltransferase
     LV515_08050
SSDB
Motif
Pfam: SHMT Aminotran_1_2 Beta_elim_lyase DegT_DnrJ_EryC1 Cys_Met_Meta_PP OKR_DC_1
Other DBs
NCBI-ProteinID: QFS34797
Position
complement(1617959..1619197)
AA seq 412 aa
MDYAGKSPELWAAIKKEEHRQQETIELIASENIVSKEVREAQGSVLTNKYAEGYPGKRYY
GGCQYIDQVEQLAIDYAKKLFGAEYANVQPHSGSQANMAVYQALLKPGDKILGMGMDAGG
HLTHGAKVNFSGKVYESYSYGLNPATEELDFDQIEQLALEINPRLIVAGASAYSKIIDWQ
KFRKIADEVGAYLMVDMAHIAGLVATGAHPNPVPVADVVTTTTHKTLRGPRGGMILSKSP
EIGKKINSALFPGTQGGPLEHVIAGKAQAFYEDLQPQFTDYINQVVKNAAAMADKFNKSA
TIRVVSGGTENHLLVIDITKTGITGKDAQDLLDEVHITTNKESIPNDQRSPFVTSGLRIG
TPAVTSRGFKEADVRQVADLIIQLLEHADDKAVKEEVAQQVHELTSKYPIEE
NT seq 1239 nt   +upstreamnt  +downstreamnt
atggattatgcagggaaatcaccagaattatgggcggcaattaagaaggaagaacaccgt
cagcaagaaacgatcgaattaattgcttccgaaaacattgtttctaaggaagtgcgggaa
gctcagggatccgtattaactaataagtatgcggaagggtacccaggcaaacgttattac
ggtggttgccaatacattgaccaggttgagcaattggcaattgactacgcaaagaagctt
tttggtgctgaatacgcgaatgtgcagccccactccggttcgcaagcaaacatggcagtt
taccaggcactccttaagccaggggataagatcctgggaatggggatggatgctggtggt
catttgacccacggagcaaaggtaaatttctcaggaaaagtttatgaatcatacagctac
ggcttaaatccggcaacggaagaactggactttgatcaaattgaacaattggcgttagag
attaatccgcgattgattgtagctggggcttctgcttacagtaaaattattgattggcaa
aaattccgtaaaattgcggatgaagttggcgcatacttaatggttgatatggcacacatt
gctggcttggtagctacgggagcccatcctaacccggtaccggttgcggatgtggttacc
acgacaacccataagactcttcgtggccctcgtggcgggatgatcctttctaagtcgcca
gaaattggtaagaagattaattcggcacttttccctggaactcagggtggcccgctggaa
cacgtcattgccgggaaagcccaagcgttttatgaggatcttcagccgcaatttactgac
tacattaaccaggttgtcaaaaatgctgcagcaatggcagacaaatttaataagtcggcc
actattcgggttgtttctgggggtaccgaaaaccacctcttggtaattgatattactaag
accggcattaccggtaaggacgctcaagacttattggatgaggtccacattacaacgaat
aaggaatcaatccctaatgatcagcgcagtccgtttgtgacgagcgggttgcggattggg
acaccagcggtaactagccggggctttaaggaagctgatgttcgtcaggtagctgatttg
attattcagttgctggaacacgctgatgataaagcagtcaaggaagaagttgcccagcag
gtccatgagctaactagtaagtacccaatcgaggaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (15)   
   KEGG PATHWAY (11)   
   KEGG MODULE (4)   
Chemical substance (7)   
   KEGG COMPOUND (7)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (6)   
   Pfam (6)   
All databases (36)   

Download RDF
DBGET integrated database retrieval system