KEGG   Lipotes vexillifer (Yangtze River dolphin): 103069249
Entry
103069249         CDS       T03090                                 
Name
(RefSeq) collagen alpha-2(I) chain-like isoform X1
  KO
K06236  collagen type I alpha
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04151  PI3K-Akt signaling pathway
lve04510  Focal adhesion
lve04512  ECM-receptor interaction
lve04611  Platelet activation
lve04820  Cytoskeleton in muscle cells
lve04926  Relaxin signaling pathway
lve04933  AGE-RAGE signaling pathway in diabetic complications
lve04974  Protein digestion and absorption
lve05146  Amoebiasis
lve05165  Human papillomavirus infection
lve05205  Proteoglycans in cancer
lve05415  Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:lve00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    103069249
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103069249
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103069249
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103069249
 09150 Organismal Systems
  09151 Immune system
   04611 Platelet activation
    103069249
  09152 Endocrine system
   04926 Relaxin signaling pathway
    103069249
  09154 Digestive system
   04974 Protein digestion and absorption
    103069249
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    103069249
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    103069249
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    103069249
  09166 Cardiovascular disease
   05415 Diabetic cardiomyopathy
    103069249
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    103069249
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:lve00536]
    103069249
Glycosaminoglycan binding proteins [BR:lve00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103069249
SSDB
Motif
Pfam: Collagen COLFI
Other DBs
NCBI-GeneID: 103069249
NCBI-ProteinID: XP_007450704
UniProt: A0A340WUG7
Position
Unknown
AA seq 1366 aa
MLSFVDTRTLLLLAVTSCLTTCQSLQEATARKGPTGDRGPRGERGPPGPPGRDGDDGIPG
PPGPPGPPGPPGLGGNFAAQYDGKGVGMGPGPMGLMGPRGPPGASGAPGPQGFQGPPGEP
GEPGQTGPAGSRGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGIR
GHNGLDGLKGQPGTPGVKGEPGAPGENGIPGQIGARGLPGERGRVGAPGPAGARGSDGSV
GPVGPAGPLGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGSRGEVGLPGVSGPVGPPGNP
GANGLHGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGNK
GEPGAAGPTGPPGPSGEEGKRGTTGEIGSAGPPGPPGLRGNPGSRGLPGADGRAGVMGPH
GSRGGTGPAGVRGPSGDSGRPGEPGLMGPRGFPGSPGNAGPAGKEGPMGLPGIDGRPGPI
GPAGTRGEPGNIGFPGPKGPTGDPGKNGEKGHAGLAGPRGAPGPDGNNGAQGPPGPQGVS
GGKGEQGPAGPPGFQGLPGPAGTAGEAGKAGERGIPGEFGLPGPAGPRGERGPPGESGAA
GPAGPIGSRGPSGPAGPDGNKGEPGVVGAPGTAGPSGPNGLPGERGAAGIPGGKGEKGET
GLRGDAGSHGRDGARGAPGAVGAPGPAGANGDRGEAGPAGPAGPSGPRGSPGERGEVGPA
GPNGFAGPAGAAGQPGAKGERGTKGPKGENGPTGPTGPVGAAGPAGPNGPPGPAGSRGDG
GPPGATGFPGAAGRTGPPGPSGITGPPGPPGPAGKEGLRGPRGDQGPVGRTGETGASGPP
GFAGEKGPSGEPGTAGSPGTPGPQGLLGAPGFLGLPGSRGERGLPGVAGSVGEPGPLGIA
GPTGARGPPGAVGNPGVNGAPGEAGRDGNPGSDGAPGRDGQAGHKGERGYPGNAGPTGTV
GAPGPQGPVGPTGKHGNRGESGPSGPVGLAGAVGPRGPSGPQGIRGDKGEPGDKGPRGLP
GLKGHNGLQGLPGLAGHHGDQGAPGTVGPAGPRGPSGPSGPSGKDGRTGHPGAVGPAGIR
GSHGSQGPSGPPGPPGPPGPPGPSGGGYDFGFEGDFYRADQPRSPPSLRPKDYEVDATLK
SLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWVDPNQGCTMDAIKVYCDFSTG
ETCIRAQPENIPVKNWYRSSKAKKHVWVGETINGGTQFEYNVEGVTTKEMATQLAFMRLL
ANHASQNITYHCKNSIAYMDEETGNLKKAVILQGSNDVELVAEGNSRFTYTVLVDGCSKK
INEWRKTIIEYKTNKPSRLPILDIAPLDIGGADQEIRLNIGPVCFK
NT seq 4101 nt   +upstreamnt  +downstreamnt
atgctcagctttgtggatacgcggactctgttgctgcttgcagtaacttcgtgcctaaca
acatgccaatctttacaagaggcaactgcaagaaagggcccaactggagacagaggacca
cgtggagaaaggggtccgccaggcccaccaggcagagatggtgatgatggcatccctggc
ccccctggtccacctggtcctcctggtccccctggtcttggtgggaactttgctgctcag
tatgatggaaaaggagttggaatgggccctggaccaatgggtttgatgggacctagaggc
cctcctggtgcatctggagcccctggccctcaaggtttccaaggacctcctggtgagcct
ggtgagcctggtcaaactggtcctgcaggttctcgtggaccacctggccctcctggcaag
gctggtgaggatggtcaccctggaaaacctggacgacctggtgagagaggagttgttggg
ccacagggtgctcgtggtttccctggaactcctggactccctggcttcaagggcattagg
ggtcacaatggtctggacgggttgaagggacagcctggtactccaggtgtgaagggtgaa
cctggtgcccctggtgaaaatggaattccaggtcaaataggagctcgtgggcttcctggt
gagagaggacgtgtcggtgcgcctggcccagctggtgcccgtggaagtgatggaagtgtg
ggtcctgtgggtcctgctggtcctcttgggtctgctggccctccaggcttcccaggtgct
cctggccccaagggtgaacttggacctgtcggtaaccctggtcctgctggtcccgcgggt
tcccgtggtgaagtgggtcttccaggtgtttctggtcctgttggacctcctggcaaccct
ggagccaatggccttcatggtgctaagggtgctgccggccttcctggcgttgctggggct
cctggcctccctggaccccggggtattcctggccctgttggtgctgctggtgctactggt
gccagaggacttgttggtgagcctggtccagctggttccaaaggagagagtggcaacaag
ggcgagcccggtgctgctgggcccacaggtcctcctggtcccagtggcgaagaaggaaag
agaggcaccactggtgaaattggatccgctggccccccaggacctcctgggctgagggga
aatcctgggtctcgtggtcttcctggagccgatggcagagctggtgtcatgggccctcat
ggtagtcgcggtggaactggccctgctggtgtgcgaggtcccagtggagattctggtcgc
cctggagagcctggcctcatgggaccccgaggttttcctggttcccctggaaatgctggc
ccagctggtaaagaaggtccgatgggcctccctggtattgatggcaggcctggaccaatt
ggcccagctggaacaagaggagagcctggcaacatcggattccctggacccaaaggcccc
accggtgatcctggcaaaaatggtgaaaaaggtcatgctggtcttgccggtcctcggggt
gctccaggtccggatggaaacaatggtgctcagggacctcctggaccacagggtgtctca
ggtggaaaaggtgaacagggtcccgctggtcctccaggcttccagggcctgcctggccct
gcaggtacagctggtgaagctggcaaagcaggagaaaggggtatccctggtgaatttggt
ctccctggtcctgctggtccaagaggggagcgtggtcccccaggtgaaagtggtgctgct
ggtcctgctggtcctattggaagccgaggtccttctggacctgcagggcctgatgggaac
aagggcgaacctggtgtggttggtgctccaggcactgctggtccatctggtcctaatgga
ctcccaggagaaaggggtgctgctggcatacctggaggcaagggagaaaagggtgaaact
ggtctcagaggtgatgctggtagccacggcagagacggtgctcgtggtgctcctggtgcc
gtaggtgcccctggtcctgctggagccaacggggaccggggtgaagctggtcctgctggt
cccgctggtccttctggtcctcgtggtagccctggtgaacgtggtgaggttggtcccgct
ggccccaatggatttgctggtcctgctggtgctgctggtcaacctggtgctaaaggagag
agaggaaccaaaggacccaagggtgaaaatggccctactggtcccacaggccccgttgga
gctgctggcccagctggtccaaatggtccccctggtcctgctggaagtcgtggtgatgga
ggcccccctggtgctacgggtttccctggtgctgctggaaggactggtcctcctggaccc
tctggtatcactggcccccctggtccccctggtcctgctggtaaagaaggacttcgtggg
cctcgcggcgaccaaggtccggttggtcgaactggagaaacaggtgcttctggccctcct
ggctttgctggtgagaagggtccctctggagagcctggtactgctggatctcctggcacc
ccaggtcctcaaggtcttcttggtgctcctggttttctgggtctcccaggctctagaggt
gaacgtggtctaccaggtgttgctggatctgtgggtgaacctggccctctcggcattgca
ggcccaactggggcccgtggtccccctggtgctgtgggtaatcctggcgtcaatggtgct
cctggtgaagctggtcgtgatggcaaccctgggagtgatggtgccccaggccgcgatggt
caagctggacacaagggggagcgtggttaccctggtaacgccggtcccactggtactgtg
ggtgcacctggtcctcaaggccctgtgggtcccactggcaaacatggaaaccgcggtgaa
tctggtccttctggtcccgttggtctggccggtgctgttggtccaagaggtcctagtggc
ccacaaggtattcgaggtgataagggagagcctggtgataaggggcccagaggtcttcct
ggcttaaagggacacaacggattgcagggtcttcctggtcttgctggtcatcatggcgat
caaggtgctcctggcactgtgggtcctgctggtcctaggggcccttctggtccttctggc
ccttctggcaaggatggtcgcactggacatcctggtgcagtcggacctgctggcattcgt
ggctctcacggtagccaaggtccttctggccctcctggtcctcctggccctcctggccct
cctggcccaagtggtggtggttatgacttcggttttgaaggagacttctacagggctgac
cagcctcgctcaccaccgtctctcagacccaaggattatgaagttgatgctactctgaaa
tctctcaacaaccagattgagactcttcttactccagaaggctctaggaagaacccagct
cgcacatgccgtgacttgagactcagccacccagaatggagcagtggttactactgggtt
gaccctaaccaaggatgtactatggatgctatcaaagtatactgtgatttctctactggc
gaaacctgcatccgggctcagcctgaaaacatcccagtcaagaactggtacagaagttcc
aaggccaagaagcacgtctgggtaggagaaactatcaatggtggtacccagtttgaatac
aatgttgaaggagtaactaccaaggaaatggctacccaacttgccttcatgcgcctgctg
gccaaccatgcctctcaaaacatcacctaccattgcaagaacagcattgcatacatggat
gaggagactggcaacctgaaaaaggctgtcattctgcaaggatccaacgatgttgaactt
gttgccgagggcaacagcagattcacttacactgttcttgtagatggctgctctaaaaag
ataaatgaatggagaaagacaatcattgaatataaaacaaataagccatctcgcctgccc
atccttgatattgcacctttggacatcggtggcgctgaccaagaaatcagattgaacatt
ggcccagtctgtttcaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (12)   
   KEGG PATHWAY (12)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   RefSeq(pep) (3)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (2)   
   Pfam (2)   
All databases (58)   

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