KEGG   Lipotes vexillifer (Yangtze River dolphin): 103074830
Entry
103074830         CDS       T03090                                 
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
  KO
K06237  collagen type IV alpha
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04151  PI3K-Akt signaling pathway
lve04510  Focal adhesion
lve04512  ECM-receptor interaction
lve04820  Cytoskeleton in muscle cells
lve04926  Relaxin signaling pathway
lve04933  AGE-RAGE signaling pathway in diabetic complications
lve04974  Protein digestion and absorption
lve05146  Amoebiasis
lve05165  Human papillomavirus infection
lve05200  Pathways in cancer
lve05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:lve00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    103074830 (COL4A3)
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103074830 (COL4A3)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103074830 (COL4A3)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103074830 (COL4A3)
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    103074830 (COL4A3)
  09154 Digestive system
   04974 Protein digestion and absorption
    103074830 (COL4A3)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    103074830 (COL4A3)
  09162 Cancer: specific types
   05222 Small cell lung cancer
    103074830 (COL4A3)
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    103074830 (COL4A3)
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    103074830 (COL4A3)
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    103074830 (COL4A3)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lve04147]
    103074830 (COL4A3)
   00536 Glycosaminoglycan binding proteins [BR:lve00536]
    103074830 (COL4A3)
Exosome [BR:lve04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   103074830 (COL4A3)
Glycosaminoglycan binding proteins [BR:lve00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103074830 (COL4A3)
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 103074830
NCBI-ProteinID: XP_007467975
UniProt: A0A340Y931
Position
Unknown
AA seq 1681 aa
MRPGTAPRPPALLLLLQLVLLVAAPTAGKGCVCKDKGQCFCDGAKGEKGEKGFPGPPGPP
GQKGYPGPEGLPGPQGPKGSPGLPGFTGPKGVRGTTGLPGFSGPPGLPGIPGHPGPYGPV
GFPGCNGSKGEQGFPGLRGTPGYPGIPGAVGLKGEKGAPAXXXXXXXXXXAEGEGVALDG
KGDPGLPGAPGFQGLPGLPGFPGPIGPPGPPGFFGFPGTMGPPGPKGHMGDKVIGQKGER
GMKGLSGPPGPPGTVIVTLTGLVNRTDLKGEKGDQGAVGQSGHPGPSGPPGESYGSEKGA
PGEPGPQGKPGKDGAPGFPGTEGAKGSKGFPGLRGEDGIKGWKGDMGPPGFRGPTEYYDA
YQEKGDEGIPGPPGPKGAPGPQGPSGPPGAPGSPGSSRPGLQGAPGVPGVKGSKGERGPP
GKSAAGLPGSPGCPGSPGPTGSPGPPGPPGGIVLRRGPPGDGGPPGHTGSPGIPGVDGPK
GEPGLLCTQCPCVPGPPGPPGLPGLDGVKGFPGRQGAAGIKGIPGSLGSAGLPGFPGFPG
DQGHPGLKGEKGEASQPERQVGAPGDPGPRGHPGRKGLDGIPGTPGVKGLPGPKGEPALS
GEKGDRGFPGDPGIPGSPGPAGPTGPSDYGPWGEPGPKGTQGLPGAPGPPGEAGPKGEIG
VLTPVPGPPGPPGAPGRAGPQGPPGIPGSTGKCDLGLPGPDGEPGIPGIGFPGPPGPKGD
QGFPGTKGSPGCPGEMGKPGLPGKPGLPGVKGEPGLAMPGEPGAPGLPGERGNSGEKGES
GLPGLPGLPGIPGTGGLDGPRGNPGQPGPPGERGPPGRCKESLSGAQGLPGLNGLKGQQG
RRGETGPKGDPGIPGLDRSGFPGEPGPPGTPGHRGEMGPPGTKGYPGNPGFLGPPGEKGM
IGMMGVPGNVGPPGPPGKPGTLGQRGSFGIPGVKGERGSPGAKGEQGDKGTPGPPGILRL
VGDKGEPGLKGLAGKPGEKGNRGIPGLPGFKGLQGLPGPPGSPDSRGDPGSIGNPGEPGP
RGVPGNMGNMGVPGTKGMKGTMGFPGLAGRPGLPGTHGPQGDKGEPGYSEDTRPGPPGPK
GDPGLPGDMGKKGGRGPPGTPGRSGPAAPEGVPGNPGSPGHPGKPGPDGDLGSKGIKGFP
GSPGIKGPPGPPGFPGNPGPAGERGNQGCDGIPGPAGEKGETGLLGALPGPRGKPGPQGA
KGDRGAPGLPGLPGRKGPVGDAGPRGPMGMTGPQGPPGFPGSIIPGQKGDRGPPGRRGNP
GEPGPPGPEGGPVEGIKGDKGFVGQPGPRGPPGTVGDTGPPGHPGAPGAPGLPGVRGDPG
FYGFPGMKGEKGNSGFLGPSGPPGRIGPKGPPGVRGDPGTVKIISLPGSPGPPGPAGEPG
MQGEPGPPGLPGNSGPCGPRGKPGKDGLPGTPGPIGEKGNKGCKGEQGPPGSDGPPGLKG
KPGDTGPPARGTTMRGFVFTRHSQTTAIPSCPEGTEPLYSGFSLLFVQGNEQSHGQDLGT
LGSCLQRFTTMPFLFCNINDVCNFASRNDYSYWLSTPALMPVDMAPITGRALEPYISRCT
VCEGPAIAIAVHSQTTDIPSCPPGWISLWKGFSFVMFTSAGSEGAGQALASPGSCLEEFR
ASPFIECHGRGTCNYYSNSYSFWLASLDPRRMFRKPIPSTVKAGELEKIISRCQVCMKRR
H
NT seq 5046 nt   +upstreamnt  +downstreamnt
atgcgccctgggactgcgccgaggccgccggcgctgctgcttctgcttcagctggtgctc
ctggtggccgcgcccactgccggcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgatggggccaaaggggagaagggggagaaaggctttccaggaccccctgggcctcct
ggccagaaaggatacccaggtccggaaggcctgcctggaccacagggacccaagggctct
ccaggacttccaggattcactggtcccaaaggcgtgaggggaacaactggattaccagga
ttttcaggtcctcctggacttccaggcatcccaggccatcctggaccgtatggacctgtc
ggttttccaggatgcaatggttctaagggtgagcaagggtttccaggacttcgggggaca
ccaggctacccgggcatcccgggtgccgttggtttgaaaggagagaaaggggctcctgct
gannnnnnnnnnnnnnnnnnnnnnnnnnnngctgaaggagaaggggtagcccttgatgga
aaaggtgaccctgggttgccaggagctccaggattccagggtttgccaggccttccaggc
tttcctggacctattggtccacctggccctccaggattctttggctttccaggaaccatg
ggacctccaggacctaagggtcacatgggcgataaagtgataggacaaaaaggagagcgg
ggtatgaaaggattatcaggaccgcccggaccaccaggaacagttatcgtgacactaacc
ggcctggttaacagaacggacctcaagggggagaagggagaccagggagccgtgggccag
tctggacaccctggaccctcagggccacctggagaatcttacggatcagaaaaaggtgct
cctggagaaccaggcccacagggaaagcctggaaaagatggtgcccccggtttccctggc
actgagggagccaaaggcagcaagggtttccctgggttaaggggcgaagatggcatcaag
gggtggaaaggagacatgggccctccaggatttcgtggtccaacagaatattatgatgca
taccaggaaaagggagatgaaggaattccaggcccaccagggcccaagggagctcctggc
ccacagggtcccagtggtccccctggagcccctggaagtcctgggtcatcaaggcctggc
ctccaaggagcccctggagtaccaggagtaaaaggaagtaaaggcgagcgaggaccccca
ggaaagagcgcagcggggcttcccgggtcccctggctgtcctggttcaccaggccctaca
gggtcgccaggacctccaggaccaccaggtggtattgttcttcgcagaggtccccctgga
gatggtggacctccaggccatacagggtctccaggaatcccaggagtcgatgggcccaaa
ggggagccaggccttttgtgcacacagtgtccttgtgtcccagggcctccaggcccccca
ggattgccggggttagatggcgtaaaaggattcccaggaagacaaggtgcagctggcatt
aaaggaatcccagggtccctaggaagcgctggtcttccaggatttccgggcttcccgggt
gatcagggtcatccaggacttaaaggagaaaaaggtgaagcatctcagccagagagacaa
gtgggtgccccaggggatccagggccccgaggacatcctggaagaaagggcttggatgga
attcctggaactccgggggtaaaaggattaccaggacctaagggagaaccggccctgagt
ggggagaagggggaccggggttttccaggggatcctggcatccctgggtccccaggacct
gcaggaccgactggaccatcagactatggaccttggggagagcctggtccaaagggcacc
caaggacttcctggagcccctggaccacctggagaagccggtcctaagggagaaatcggt
gttttgacaccagttccagggcccccaggacctcctggagccccaggccgtgctggcccc
caaggtccacctggtatccctggatccacaggaaaatgtgatctgggtcttcctgggcct
gatggtgaaccaggaattccaggaatcggattccctgggcctcctggacctaagggagac
caaggttttccaggaacaaaaggatcaccaggctgtcctggagaaatgggaaagccaggg
ttacctggaaagccgggcctcccaggagtcaagggagaaccagggctagccatgcctgga
gagccaggagcaccaggtttgccaggagaaagaggcaactctggggaaaagggagaaagt
ggactccctggacttccaggtctccctggaattccaggaactggagggcttgatggacca
cgagggaatccagggcagcctggaccacctggagaaagaggccccccaggaaggtgcaaa
gaaagtctcagtggagctcaaggccttccaggcttaaatggattgaaagggcaacaaggc
agaagaggtgaaacagggccaaagggagacccaggtattccaggcttggataggtcagga
tttcctggagaacctggaccaccaggaacgccgggtcatcgaggggagatgggaccacct
ggtacaaaaggatatccgggaaatccaggatttttagggccaccaggtgaaaaaggaatg
attgggatgatgggggttcccggaaacgttggccctccggggcctcctgggaagccaggc
accctgggacagagggggagctttggaattccaggagtaaaaggcgagagaggatcccca
ggtgccaaaggggaacaaggagataaaggaactccagggcctcctggaatattacgctta
gtcggggacaaaggggaaccaggactcaaaggacttgcagggaagcctggtgagaaagga
aacagaggcattccaggattaccaggtttcaaaggactccaagggctacctggaccacca
ggatcaccagactccagaggagatccaggcagcattgggaatcctggtgagccaggacca
cgtggtgtgccaggaaacatgggaaacatgggggtgccaggtactaaaggaatgaaggga
actatgggattcccaggtctagctggaagaccaggcctcccaggtactcatggtccccaa
ggagataagggagagccaggttattcagaagatacaaggccaggaccaccaggaccaaag
ggagatccaggattgccaggtgacatgggaaagaaaggaggtagagggccacctggcaca
cctggacgttcaggccccgctgcaccagagggagttcctgggaatcccggaagccctggc
cacccaggaaagcccggtcctgatggtgatttggggtctaaaggaatcaaaggtttccct
ggctctccaggaataaaaggccctccaggccctccaggattcccaggaaatcctggacca
gcaggtgagagaggtaatcaaggatgtgatggaattcctggtccagctggagaaaaagga
gaaacaggtttgctgggagcacttccaggcccaagagggaaacctggtcctcaaggagcc
aaaggagacaggggagccccaggcttgccgggcctccctggcaggaaagggccagtggga
gatgctgggcctcgagggcccatgggcatgacaggacctcaagggccaccaggctttcct
ggttccatcatccctggccaaaaaggagatcgaggtccacctggcagaagaggaaaccca
ggtgagcctggtccccctggacctgaagggggtcccgtagaaggcataaaaggagacaag
ggatttgtgggccagcctggcccaagaggtccgcctggaactgtaggagacacggggcca
ccaggtcatccgggagcaccaggtgccccaggtcttccaggggtcagaggtgatcctgga
ttctatggatttccaggcatgaaaggggagaagggtaattcaggatttctgggaccaagt
ggacctccagggcgaatcgggccaaaaggaccacctggtgtacgtggagaccctggcaca
gtgaagatcatctcccttccaggaagcccaggcccacctggcccagctggagaaccaggg
atgcaaggagaacctgggcccccggggctaccgggaaactcaggaccctgtgggccaaga
ggtaaaccaggcaaggatggactaccgggaacccctggaccaattggtgaaaaaggcaac
aaaggttgtaaaggagagcaaggaccgcctggatccgatggcccgccaggcttgaagggg
aaacctggagacactggaccacctgcaagggggacaacgatgaggggctttgtcttcacc
cggcacagccagaccacggcgattccctcctgtccagaagggacagaaccactctatagt
gggttttctcttctctttgtacaaggaaatgaacaatcccatggacaggacctgggaact
cttggcagctgcctgcagagatttactacaatgccattcttattctgcaatatcaatgat
gtatgtaatttcgcatctcgaaacgattattcatactggctgtcaacaccagctctgatg
ccagtggacatggctccaattactggccgggccctggagccttatattagcagatgcact
gtctgtgaaggtcctgcaattgccatagctgttcacagccaaactactgatatcccctca
tgtcctcctggctggatttctctctggaaaggattttctttcgtcatgttcacaagtgca
ggttcagagggcgctgggcaggcactggcatcccctggctcctgcttagaagaattccga
gccagtccatttatagaatgtcatggaagaggaacatgcaactactattcaaattcctac
agtttctggctggcttcattagaccccagaagaatgttcagaaaacctattccatcaact
gtgaaagctggggagttagaaaagataataagtcgctgtcaggtgtgcatgaagaggaga
cattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (11)   
   KEGG PATHWAY (11)   
Genome (1)   
   KEGG GENOME (1)   
Gene (59)   
   KEGG ORTHOLOGY (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (79)   

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