KEGG   Lipotes vexillifer (Yangtze River dolphin): 103076461
Entry
103076461         CDS       T03090                                 
Symbol
SETDB1
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
  KO
K11421  [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:2.1.1.366]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve00310  Lysine degradation
lve01100  Metabolic pathways
lve04550  Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:lve00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00310 Lysine degradation
    103076461 (SETDB1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    103076461 (SETDB1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:lve03036]
    103076461 (SETDB1)
Enzymes [BR:lve01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.366  [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
     103076461 (SETDB1)
Chromosome and associated proteins [BR:lve03036]
 Eukaryotic type
  Histone modification proteins
   HMTs (histone methyltransferases)
    HKMTs (histone lysine methyltransferases)
     103076461 (SETDB1)
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    103076461 (SETDB1)
SSDB
Motif
Pfam: DUF5604 Tudor_4 Tudor_5 MBD Pre-SET SET DUF4537 Tudor_3 Tudor_2 Chromo
Other DBs
NCBI-GeneID: 103076461
NCBI-ProteinID: XP_007460299
UniProt: A0A340XM00
Position
Unknown
AA seq 1288 aa
MSSLPGCIGLDAATAAVESEEIAELQQAVVEELGISMEELRQFIDEELEKMDCIQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKKSSSQDL
HKGTLSQMSGELSKDGDLVVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKFDNKGKS
LLSGNHIAYDYHPPADKLYVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRYLVSFDDG
YASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLIKTEWEG
TWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASTLEKKQGGQLRTR
PNMGAVRSKGPVVQYTQDLTSTGTQFKPVEPPQPTAPPAPPAPPGPPLSPQAGDSDLESQ
LAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENAPGGKPGISQTHRSPLGSTTSAPAP
PAPPAPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRPMRNEQYRGKNPLLV
PLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFETGCDFLFLEMFCLDP
YVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYSKERIPGKGVFINTG
PEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINSNSGYQYKRLEECLPTGVYECN
KRCNCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSFVCIYAGKILTDDFA
DKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQEDGNSGTEDPEESN
DDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSEMPSKDSRPPDVGPPRVPVPPS
IPVGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSEGGEGHAGGGRGEAE
KASTSGLGFKDEGDIKQPKKEDPDDRNKMSVVTESSRNYGYNPSPVKTEGLRRPPSKTSM
HQSRRLMASAQSNPDDILTLSSSTESEGESGTSRKPTAGQTSATAVDSDDIQTISSGSEG
DDFEDKKNMSGPMKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKGESAPVRKNTRQFYD
GEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVAFFASKIRAGTELTW
DYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq 3867 nt   +upstreamnt  +downstreamnt
atgtcctccctccctgggtgcattggtttggatgcagcaacagctgcagtggagtctgaa
gagattgcagagctgcaacaagcagtggttgaggagctgggtatctctatggaggaactt
cggcagttcattgatgaagaactggaaaagatggactgtatacagcagcgcaagaagcaa
ctagcagagttggagacatgggtaatacagaaggaatccgaggtagcccatgttgaccag
ctgtttgatgatgcatccagggcagtgactaattgtgagtctttggtgaaggacttttac
tccaaactgggactacagtaccgggacagtagttctgaagatgaagcttcccggcctaca
gaaataattgagattcctgatgaagacgatgatgtcctcagtattgattcaggtgatgct
gggagcagaactccaaaagaccagaagctccgtgaagctatggctgccttaagaaagtca
gctcaagatgtccagaagttcatggatgctgtcaacaagaagagcagttcccaggatcta
cacaaaggaaccttgagtcaaatgtctggagaattgagtaaagatggtgacctggtagtt
agcatgcgcattctgggcaagaagagaactaagacgtggcacaaaggcacccttattgcc
atccagacggttgggccaggaaagaagtacaaggtgaaatttgacaacaaaggaaagagt
cttctgtcagggaaccatattgcctatgattaccaccctcctgctgacaagctgtatgtg
ggcagtcgagtagtggccaaatacaaagatgggaatcaggtctggctctacgctggcatt
gtagctgagacaccaaacgtcaaaaacaagctcaggtacctggtttcttttgatgatggc
tacgcttcctatgttacacagtctgaactgtatcccatttgccggccactgaaaaagact
tgggaggacatagaagacatctcctgccgagacttcatagaggagtatatcactgcttac
cccaaccgccccatggttttgctcaagagtggacagcttatcaagactgagtgggaaggc
acgtggtggaagtcccgagttgaggaggtggacggcagcctagtcaggatcctcttcctg
gatgacaaaagatgtgaatggatctatcgaggctctacacggctggagcccatgttcagc
atgaagacatcctcagcctctacactagagaagaagcaaggaggacagctcaggacacgt
ccaaatatgggtgctgtgaggagcaaaggtcctgtggtccagtacactcaggatctgacc
agtactggaacccagttcaagccagtggagccccctcagcctacagctccacctgcccca
cctgccccacctggtccacctctgtccccccaggcaggtgacagtgacttggaaagccag
cttgcccaatctcggaagcaggtagccaaaaaaagcacatccttccggccaggatctgtg
ggctctggtcattcctcccctacatcccctgcactcagtgaaaatgcccctggtgggaaa
cctgggatcagtcaaacacatagatcacctttaggatccacaacctctgccccagcaccc
ccagctcccccagcacctccagccttccatggcatgctggagcgggccccggcagagccc
tcctaccgcgcccccatggagaagcttttctacttacctcatgtctgcagctatacttgt
ctgtctcgagtcagacctatgagaaatgagcagtatcggggcaagaaccctctcctagtc
ccactactgtatgacttccggcggatgacagcccggcgccgagttaaccgcaagatgggc
tttcatgttatctataagacaccctgtggcctctgccttcggacaatgcaagagattgag
cgctacctttttgagacaggctgtgacttcctcttcctggagatgttctgtttggatcca
tatgttcttgtggaccgaaagtttcagccctataagcctttttactatattttggacatc
acctatgggaaggaagatgttcctctgtcctgtgtcaatgagattgacacaactccccca
cctcaggtggcctacagcaaggaacgaatcccgggcaagggtgttttcattaacacaggc
cctgaatttctggttggctgtgactgtaaagatgggtgccgggacaagtccaagtgtgcc
tgccatcagctaactatccaggctacagcctgcaccccaggcggccaaatcaactctaac
tctggctaccagtacaagagactagaagagtgtctgcccacaggagtttatgagtgtaac
aaacgctgcaattgtgacccaaacatgtgcacaaaccggttggtgcagcatggactgcag
gttcgactgcagctcttcaagacccagaacaagggctggggtatccgctgcttggatgac
attgccaaaggctcctttgtctgtatttatgcaggcaaaatcctgactgatgactttgct
gacaaggagggcctggaaatgggtgatgagtattttgccaatctggaccatatcgagagc
gtggagaacttcaaggaaggatatgagagtgatgccccctgttcctctgacagcagtggt
gtagacttgaaggaccaggaagatggcaacagcggtacagaggaccccgaagagtccaat
gacgatagctcagatgataacttctgtaaggatgaggacttcagcaccagctcggtgtgg
cgcagctatgctacccggcggcagacccggggccagaaggagaatggattgtctgagatg
ccttccaaggactctcgccccccagacgttgggcccccacgtgttcctgtccctccatcg
atccctgtaggtggctgcaatccaccttcctctgaagagacacccaagaacaaagtggcc
tcgtggttgagctgcaatagtgtcagtgaaggtggctttgctgactctgatagccgttca
tccttcaaaactagtgaaggtggggaaggtcacgctgggggaggcagaggggaggctgag
aaggcttccacctcagggctgggcttcaaggatgagggtgacatcaagcagcccaagaaa
gaggaccctgatgaccggaacaagatgtcagtagttactgaaagctctagaaattatggt
tacaatccttctcccgtgaagactgaaggacttcgccgcccaccaagtaagactagcatg
catcagagccgacgactcatggcctctgctcagtcaaaccctgatgacatcctgacactg
tccagcagcacagaaagtgagggggaaagtgggaccagccgaaagcccactgctggccag
acttcagccacagccgttgacagtgatgatatccagaccatctcctctggctctgaaggg
gatgactttgaggacaagaagaacatgtctggtccaatgaagcgccaagtggcagtaaaa
tcaacccggggttttgctcttaaatcaacccatgggattgccattaaatcaaccaacatg
gcatccgtggaaaagggagagagtgcacctgttcgtaagaacacacgccaattctacgat
ggggaggagtcttgctacatcatcgatgccaagcttgaaggcaacctgggccgctacctc
aatcacagctgcagccccaacctgtttgtccagaatgtcttcgtggatactcatgatctt
cgcttcccgtgggtggccttctttgccagcaaaatccgggctgggacagaactcacctgg
gactacaactacgaggtgggcagcgtggagggcaaggagctgctttgctgctgtggggcc
atcgaatgcagagggcgtcttctttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (10)   
   Pfam (10)   
All databases (55)   

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