KEGG   Lipotes vexillifer (Yangtze River dolphin): 103080964
Entry
103080964         CDS       T03090                                 
Symbol
VIM
Name
(RefSeq) vimentin
  KO
K07606  vimentin
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04820  Cytoskeleton in muscle cells
lve05169  Epstein-Barr virus infection
lve05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:lve00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103080964 (VIM)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    103080964 (VIM)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    103080964 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lve03019]
    103080964 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lve04812]
    103080964 (VIM)
   04147 Exosome [BR:lve04147]
    103080964 (VIM)
Messenger RNA biogenesis [BR:lve03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     103080964 (VIM)
Cytoskeleton proteins [BR:lve04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     103080964 (VIM)
Exosome [BR:lve04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103080964 (VIM)
  Exosomal proteins of other cancer cells
   103080964 (VIM)
SSDB
Motif
Pfam: Filament Filament_head DUF1664 TolA_bind_tri TPR_MLP1_2 RBD-FIP Sec10_N DUF573 DUF4515 Laminin_II CENP-F_leu_zip
Other DBs
NCBI-GeneID: 103080964
NCBI-ProteinID: XP_007460935
UniProt: A0A340XPH9
Position
Unknown
AA seq 466 aa
MSSRSVSSSSYRRMFGGPGTASRPSSSRSYVTTATRTYSLGSALRPGTSRSLYASSPGGV
YATRSAAVRLRSSMPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLSE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDE
EIQELQAQIQEQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRRLLEGEESRIALPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq 1401 nt   +upstreamnt  +downstreamnt
atgtccagcaggtccgtgtcctcgtcctcctaccgcaggatgttcggcggccccggcacc
gcgagccggccgagctccagccggagctacgtgaccacggccacccgcacctacagcctg
ggcagcgcgctgcgccccggcaccagccgcagcctctacgcctcgtccccgggcggcgtg
tacgccacgcgatccgcggccgtgcgcctgcggagcagcatgcccggcgtgcgcctgctg
caagactcggtggacttctcgctggccgacgccatcaacaccgagttcaagaacacccgc
accaacgagaaggtggagctgcaggagctgaacgaccgcttcgccaactacatcgacaag
gtgcgcttcctggagcagcagaacaagatcctgctggccgagctcgagcagctcaagggc
cagggcaagtcgcgcctgggggacctctacgaggaggagatgcgagagctgcgccggcag
gtggaccagctcaccaacgacaaagcccgcgtcgaggtggagcgcgacaacctgtccgag
gacatcatgcgtctccgggagaagttgcaggaggagatgcttcagagggaggaagccgag
agcaccctgcagtctttcagacaggatgttgacaatgcttcattggcacgtctggacctg
gagcgtaaagtggaatccttgcaagaagagattgcctttttgaagaaactacatgatgag
gaaatccaggagctgcaggcccagattcaagaacagcacgtccagatcgatatggatgtt
tccaagcccgacctcacggctgccctgcgtgacgtccgccagcagtacgagagcgtggcc
gccaagaacctccaggaggctgaggaatggtacaagtccaagttcgctgacctctccgag
gctgctaaccgcaacaacgatgccctgcgccaggccaagcaggagtcgaacgagtaccgt
cggcaggtgcagtccctcacctgcgaggtggatgccctcaaaggcactaacgagtctctg
gaacgccagatgcgtgaaatggaagagaactttgccgtggaagctgctaactaccaagac
actattggccgcctgcaggacgagattcagaacatgaaggaagagatggctcgccacctg
cgtgaataccaagatctgctgaatgttaagatggctctcgacatcgagatcgccacctac
aggaggctgctggaaggagaggaaagcaggattgctctgcctcttccaaacttttcttcc
ctgaacctgagggaaaccaatctggattcactccctctggttgacacccattcaaaaagg
acacttctgattaagacggttgaaaccagagatggacaggttatcaacgaaacttcccag
catcacgatgatctggaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (7)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (29)   

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