KEGG   Lipotes vexillifer (Yangtze River dolphin): 103087941
Entry
103087941         CDS       T03090                                 
Symbol
ATG4C
Name
(RefSeq) cysteine protease ATG4C
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve04136  Autophagy - other
lve04140  Autophagy - animal
Brite
KEGG Orthology (KO) [BR:lve00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    103087941 (ATG4C)
   04136 Autophagy - other
    103087941 (ATG4C)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:lve01002]
    103087941 (ATG4C)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:lve04131]
    103087941 (ATG4C)
   03029 Mitochondrial biogenesis [BR:lve03029]
    103087941 (ATG4C)
Peptidases and inhibitors [BR:lve01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   103087941 (ATG4C)
Membrane trafficking [BR:lve04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    103087941 (ATG4C)
Mitochondrial biogenesis [BR:lve03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    103087941 (ATG4C)
SSDB
Motif
Pfam: Peptidase_C54 ATG4_LIR
Other DBs
NCBI-GeneID: 103087941
NCBI-ProteinID: XP_007464356
UniProt: A0A340XSP6
Position
Unknown
AA seq 458 aa
MEATGTDEVDKLKTKFISAWNNMKYSWVLKTKTYFSRNSPVLLLGKCYHFKYEDENELLP
VSSGCTIEDHVIAGSVEEFRKDFISRIWLTYREEFPLIEGSALTTDCGWGCTLRTGQMLL
AQGLVLHFLGRAWTWPDALNIENSDFESWTSNTVKKFTASFEASLSAERELKTPTISLKE
TIGRFSDDREMQNEIYHRKIISWFGDSPLAVFGLHQLIEYGKKSGKKAGDWYGPAVVAHI
LRKAVEEARHPDLQGITIYVAQDCTVYSSDVIDKQCTSMASDNTDDKAVIILVPVRLGGE
RTNANYLDFVKGILSLEYCVGIVGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF
PLETFHCPSPKKMSFRKMDPSCTIGFYCRNVQDFKQASEEITKMLKISSKEKYPLFTFVN
GHSRDYDFTSTTTNEEDFFSEDEKKRLKRFSTEEFVLL
NT seq 1377 nt   +upstreamnt  +downstreamnt
atggaggccacaggaacagatgaagttgacaagctgaaaactaaatttatatctgcttgg
aacaacatgaaatatagttgggtgttgaaaacaaagacatattttagtagaaattcccct
gtattattgcttggaaagtgttaccattttaaatatgaagatgaaaatgaactgttacct
gtaagctccggatgtacaatagaagatcatgtgattgcgggaagtgtagaagaatttcgt
aaagacttcatctcaagaatatggcttacctacagggaagagtttcctctaatagaaggc
tcagctttgacaacggactgtggttggggctgtacactaagaactggccagatgctgttg
gctcaaggactcgtactacacttccttggtagagcttggacctggcctgatgctttgaac
attgaaaattcagactttgaatcatggacttccaacactgtaaaaaaatttactgcatca
ttcgaagcatcgctttcagcggaaagagaactcaaaaccccaacaatttctctgaaggaa
acaatcgggagattttctgatgatcgtgaaatgcaaaatgaaatttatcacaggaaaatc
atctcttggtttggtgattcccccttggctgtctttggtttacatcaactaatagaatat
ggaaagaagtctgggaaaaaagctggagattggtatgggccagctgtggttgctcacatt
ttaagaaaagcagttgaagaagcaagacacccagatttacaaggaataactatttatgtt
gcgcaagattgtacagtttacagttctgatgtaattgataaacagtgcacttccatggcc
tctgataatacagatgacaaagctgttattattctagttcctgttagacttggtggagaa
agaaccaatgccaactatttagattttgtaaagggtattttaagccttgaatattgtgtg
ggtattgttggtggcaaacctaaacagtcatattactttgctggatttcaagatgacagt
ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc
cctcttgagacattccactgcccttctcccaaaaagatgtcatttcgaaaaatggatcct
agctgtacaataggattttactgtcgaaatgttcaggacttcaaacaagcttctgaagaa
atcactaagatgctgaaaatttcttctaaggagaaatatcccttatttacttttgtaaat
ggtcattccagagactatgattttacatctactacaaccaatgaagaagactttttctca
gaggatgaaaagaaaagattaaaaagatttagcacagaagagtttgtcttgctgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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