KEGG   Lipotes vexillifer (Yangtze River dolphin): 103090783
Entry
103090783         CDS       T03090                                 
Symbol
TAF5L
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
lve  Lipotes vexillifer (Yangtze River dolphin)
Pathway
lve03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:lve00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103090783 (TAF5L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lve03021]
    103090783 (TAF5L)
   03036 Chromosome and associated proteins [BR:lve03036]
    103090783 (TAF5L)
Transcription machinery [BR:lve03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103090783 (TAF5L)
   Coactivators
    SAGA/TFTC/STAGA complex
     103090783 (TAF5L)
Chromosome and associated proteins [BR:lve03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     103090783 (TAF5L)
    STAGA complex
     103090783 (TAF5L)
    TFTC complex
     103090783 (TAF5L)
    SAGA complex
     103090783 (TAF5L)
    SLIK complex
     103090783 (TAF5L)
SSDB
Motif
Pfam: WD40 TFIID_NTD2 ANAPC4_WD40 NBCH_WD40 RMC1_N PROPPIN Nup160 eIF2A Nbas_N Ge1_WD40 vATP-synt_AC39
Other DBs
NCBI-GeneID: 103090783
NCBI-ProteinID: XP_007445937
UniProt: A0A340WED4
Position
Unknown
AA seq 638 aa
MACIEISSERIKCCIIDDLVGAKVVCSGKWNLMIQSGLSDYRDAGVEDVMKRVRTEQIQM
AVSCYLKRRQYGDADGPLKQGLRLSQSAEEMATSLAVQSESGCANIVSAAPCQAEPQQYE
VQFGRLRNFLTDSESQHSHEVMPLLYPLFVYLHLNLVQNSPKSTVESFYSRFHGMFLQNA
SQKDVIEQLQTTQTIQDILSNFRLRAFLDNKYVVRLQEDSYNYLLRYLQSDNNTALCRVL
TWHIHLDVQPTKRTDYQLYASGGPSRGEGGGLEPADVPAPILQNEAALEVLQESIKRVKD
GPPSLTTICFYAFYNTEQLLNTAEVSPDSKLLAAGFDNSCIKLWSLRSKKLKSEPHQVDV
SRIHLACDILEKEDDEDDNAGSEMKVLRGHCGPVYSTRFLADSSGLLSCSEDMSIRYWDL
GSFTNTVLYQGHAYPVWDLDVSPHSLYFASGSHDRTARLWAFDRTHPLRIYAGHLADVDC
VKFHPNSNYLATGSTDKTVRLWSTQQGNSVRLFTGHRGPVLSLAFSPNGKYLASAGEDQR
LKLWDLASGTLYKELRGHTDNITSLTFSPDSSLIASASMDNSVRIWDIRSAHCSAPADGS
SSELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq 1917 nt   +upstreamnt  +downstreamnt
atggcttgcattgagatttccagcgagaggatcaagtgctgtatcatagatgatttggta
ggagcgaaggtggtgtgttctggaaaatggaatttgatgattcagagtggcttaagtgac
tacagagacgctggtgttgaagatgtcatgaaacgggtgcgcaccgagcagattcagatg
gccgtgtcctgctacctcaaacgccggcagtacggggacgcggacggcccactgaagcaa
ggcctgcggctgtcgcagagcgccgaggagatggccaccagcctcgcagtccaatcagaa
tctggttgtgccaacatagtgtctgcggccccttgccaggcagagccccagcaatatgaa
gtgcagttcggacggctgcggaatttcctcaccgattctgaatcccagcacagccatgaa
gtgatgcctctcctctaccccctctttgtctacctccacctcaacctggtccagaacagt
cccaagagcacggtggaaagcttttacagccgcttccatggaatgtttctgcagaatgcc
agccagaaggacgtcatcgagcagctgcagaccacccagaccatccaggacatcctgtct
aacttccggctgcgggccttcctggacaacaagtacgtggtccgcctgcaggaagacagc
tacaactaccttctccgctacctccagagtgacaataacaccgcgctgtgcagagtcctc
acctggcacatccacctggatgtgcagcccaccaagaggacggactaccagctctacgcc
agcggcggcccctcccggggcgagggcggcggcctggagcctgccgacgtgcctgcgccc
atcctgcagaacgaggccgcgctggaggtcctgcaggagagcattaagcgtgtcaaggac
ggtcccccctctctcaccaccatctgcttctacgccttctacaacacggagcagctgctg
aacacggcggaggtctccccggacagcaagttgctcgccgctggctttgacaactcctgt
ataaaactgtggagtctgcgctccaagaagttaaaatccgaaccgcatcaagtagacgtg
tcccgcatccacttggcttgtgatatcttggagaaggaggacgacgaggacgataacgca
ggctcggagatgaaggtcctgcggggacactgcgggccagtgtacagcaccaggttcctt
gcggacagctcggggctgctctcctgctctgaggacatgtccatcaggtactgggacctc
ggcagcttcaccaacaccgtgctgtaccagggccacgcctaccccgtgtgggacctggac
gtcagcccgcacagcctgtacttcgccagcgggtcccacgaccgcacggcccggctgtgg
gcgtttgaccggacgcacccgctacgcatctatgccgggcacctggcggacgtggactgc
gtcaagttccaccccaattcaaactacttagccacgggctcgaccgacaagacggtccgg
ctgtggagcacccagcaggggaactcggtgaggctcttcacgggccaccgcggccccgtg
ctctctctggccttttcccccaacggtaagtacttggcgtcggcgggcgaggaccagcgg
ctgaagctgtgggacttggcgtctgggaccctctacaaagagcttcggggccacacggac
aacatcaccagcctcaccttcagcccggacagcagcctgatcgcgtcggcgtccatggac
aactcggtgcgcatctgggacatcaggagcgcgcactgcagcgcacccgccgacggctcg
tccagcgagctcgtgggcgtctacaccggccagatgagcaacgtgctgagcgtgcagttc
atggcctgcaacctcctgctggtgaccggaatcacacaagaaaatcaggaacattga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (30)   

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