KEGG   Yoonia vestfoldensis: LOKVESSMR4R_02993
Entry
LOKVESSMR4R_02993 CDS       T04854                                 
Name
(GenBank) uracil-DNA glycosylase
  KO
K21929  uracil-DNA glycosylase [EC:3.2.2.27]
Organism
lvs  Yoonia vestfoldensis
Pathway
lvs03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:lvs00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    LOKVESSMR4R_02993
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lvs03400]
    LOKVESSMR4R_02993
Enzymes [BR:lvs01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.27  uracil-DNA glycosylase
     LOKVESSMR4R_02993
DNA repair and recombination proteins [BR:lvs03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     LOKVESSMR4R_02993
SSDB
Motif
Pfam: DUF4130 UDG
Other DBs
NCBI-ProteinID: ARU02282
UniProt: A0A1Y0EG77
Position
2963396..2964823
AA seq 475 aa
MTYAVTLPDRGTLDAWRDAARIAISHRIAPDLIDWTGGGGLFAASPLPDELGPHQAKVPA
AFFDIARSAIWHKSPDRAALLYQALWRIDQRTGDPLSAADPLGRRLQLLAKNVRRDIHKM
HAFVRFRELPSDSTRRRFAAWFEPEHHTLEPGVPFFAKRFADMDWMIATPALTAHFEGGK
LRFGPAAARPDLPDDASETLWATYFANIFNPARIKLDAMRSEMPKKYWKNLPETQLIPAM
LKDAEARVQRMRAAGSTPARPGAAAISTRYRAAMPQAPDLPDTMDQARQAALQCRRCDLC
EKATQTVWGKGAANAALMIVGEQPGDREDLEGQPFVGAAGQVLHQAMADAGIAPADAWLT
NAVKHFKFTPRGKRRIHQSPDRAEIEHCRWWLGLELGFVQPKLTVALGASAAYALTGNAA
PLADRQGQIEPGLHDGPVLVTWHPSYILRLPDPAAQAQARADLVAALYEAARRAT
NT seq 1428 nt   +upstreamnt  +downstreamnt
ttgacctatgccgtcacgctgcccgaccgcggcacgctggacgcatggcgtgatgctgcg
cggatcgcgatttcgcaccggatcgcgcccgatctgatcgactggacagggggtggcggg
ttgttcgcggccagccccctgcctgatgaattggggccgcatcaggccaaggtgcccgcg
gcctttttcgacatcgccagatccgcgatctggcacaaatcccccgatcgcgcggcgctg
ctctatcaggcgctgtggcggatcgaccagcggacaggtgatccattgtccgctgccgat
cctttggggcggcggctgcaattgctggccaagaacgtccgccgcgatatccacaagatg
catgctttcgtgcggttccgcgaattgcccagcgacagcacccgccgccgtttcgcggca
tggttcgagccggaacatcacacgctggaacccggtgtgccgttctttgccaagcgcttt
gccgatatggattggatgatcgcgacacccgccctgactgcgcatttcgagggcggcaag
ctgcgctttggcccggccgccgcgcgccctgacctgccggatgatgcgtcagaaaccctt
tgggcgacttattttgccaatatctttaatcctgcgcggatcaagcttgatgcgatgcga
tccgagatgcccaagaaatattggaagaacctgcccgaaacccagctgatccccgccatg
ctgaaagacgccgaagcccgtgtgcagcggatgcgcgcggctggcagcacgcctgcccgc
cccggtgcggcggcgatttccacccgctaccgcgccgccatgccacaggcaccggacctg
cccgatacgatggatcaggcgcggcaggccgccttgcaatgtcgccgctgcgatctgtgc
gaaaaggcgacgcagacggtctggggcaagggcgcagcgaatgccgccttgatgatcgtg
ggcgaacagcccggcgaccgcgaggatctggaagggcagccctttgtcggcgctgcggga
caggtcttgcatcaggcgatggccgatgccgggattgcccccgccgacgcatggctgacc
aatgcggtcaagcatttcaaattcaccccgcgcggcaaaaggcgcatccatcaatcacct
gaccgcgcggaaatagagcattgccgctggtggctggggctggaactgggctttgtgcag
ccgaaactgaccgtggcgctgggagccagtgccgcctacgcgctgaccggcaatgccgcc
ccattggccgaccgacagggccagatcgaaccgggcctgcatgacgggccggtgctggtg
acatggcatccgtcctatatcctgcgcctgcctgatccggcggcacaggcccaagcgcgc
gccgatctggtcgcagccctttacgaagccgcccgccgcgccacttag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (19)   

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