KEGG   Yoonia vestfoldensis: LOKVESSMR4R_03443
Entry
LOKVESSMR4R_03443 CDS       T04854                                 
Symbol
rpoN1
Name
(GenBank) RNA polymerase sigma-54 factor 1
  KO
K03092  RNA polymerase sigma-54 factor
Organism
lvs  Yoonia vestfoldensis
Pathway
lvs02020  Two-component system
lvs02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lvs00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    LOKVESSMR4R_03443 (rpoN1)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    LOKVESSMR4R_03443 (rpoN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lvs03021]
    LOKVESSMR4R_03443 (rpoN1)
Transcription machinery [BR:lvs03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     LOKVESSMR4R_03443 (rpoN1)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR Phage_CII HTH_17
Other DBs
NCBI-ProteinID: ARU02715
UniProt: A0A1Y0EGK0
Position
complement(3409054..3410400)
AA seq 448 aa
MLYMSPNAHLAQKQSLVFTPQLQQAIKLLLFNNIELSNYVEKIAEENPFVEVELPQIRIA
TPPLISASQRDPSFDPISLLADTSTQGFAAQLFAQVDDILTEQAERAIGYAIASHVEPSG
WLSVPLSVLASNLGLDEQPVHAVLRKLQTAEPAGLFARNLAECLALQIALDDPDRAALLI
VVENLQLVERGAIVELRRKIGCSAEEVKRLLRRLRGFNPKPGLALADDAMMAARAPDILA
ARGPDGAWFVELNGATLPILKVDEIEGRRVRKLVKHDSDQAYVRDTLGNARWLKRAIAQR
NETSIKVAAEIVRFQKAFLEHGMQHMRPLKLKTVADAVGLHESTISRVTSSLMMQTPQGT
FPLKTFFSTAIELDGTDEGVSARMVREKIRNLIGAENPSGPLSDEFIAQSLQCEGLNIAR
RTIAKYRKLDKIPSSSQRRRSYRLRAAV
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgttgtatatgtcccccaatgcgcatcttgcgcaaaagcagtcgcttgtttttacgccg
cagcttcagcaggcgataaaactgctgcttttcaataatatcgagctgtcgaactacgtc
gaaaagattgccgaagaaaatccgtttgtagaggtcgagctgccgcaaatacgcattgcg
acgccgcccctgatcagcgcatcgcagcgcgacccgtcttttgatccgatcagcctgttg
gccgatacctcaacgcaaggtttcgctgcccagcttttcgcgcaggttgacgatattttg
acagaacaggctgaacgcgccatcggctatgcaatcgccagccatgtcgagccgtcgggc
tggttgtcggtcccgctgtctgtgctggccagcaatctgggtctggatgaacagccggtc
cacgccgtcttgcgcaaattgcaaacggcagagcctgccgggctgtttgccagaaacctc
gcggaatgtctggccttgcagattgccttggatgacccggatcgcgcggccttgctgatc
gtggtggaaaacctgcagctggtggaacgcggtgccatcgttgaattgcgcaggaaaatc
ggatgttcggcagaggaggtaaagcgcctgttgcgccgtttgcgcggtttcaaccccaag
ccgggtcttgcgctggcggatgatgcaatgatggcggcgcgcgcgcccgatatccttgcc
gcgcgcggccctgacggcgcgtggttcgtggaattgaatggcgcgaccttgcccattctg
aaagtcgatgagatcgaaggccgccgcgtgcgcaagcttgtcaaacatgacagcgaccaa
gcctatgtgcgcgacacgctgggcaatgcgcgctggctgaagcgggcgattgcgcagaga
aacgagaccagtatcaaggtcgccgccgagatcgtgcgttttcagaaagcctttcttgaa
catggtatgcaacatatgcggccgctgaagttgaagaccgtcgcagatgcggtcgggctg
catgaaagcaccatcagcagggtgacatcatccttgatgatgcaaacgccgcaggggacg
ttcccgctaaagacattcttcagcacggccatcgaacttgatggcacggacgagggtgta
tcagcgcgtatggtgcgcgaaaagatccgcaatctgattggggcagagaatccgtcgggg
ccgttaagcgatgagtttatcgcgcagagcttgcaatgcgagggtctgaacattgcaagg
cggacgatcgccaaatatcgcaaactcgacaagatcccgtcatcgtcgcaacggcgcaga
tcctaccgtctgcgcgcggccgtgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (35)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (50)   

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