KEGG   Legionella waltersii: SAMEA4504053_1889
Entry
SAMEA4504053_1889 CDS       T06599                                 
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lwa  Legionella waltersii
Pathway
lwa03410  Base excision repair
lwa03430  Mismatch repair
lwa03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lwa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    SAMEA4504053_1889 (recJ)
   03430 Mismatch repair
    SAMEA4504053_1889 (recJ)
   03440 Homologous recombination
    SAMEA4504053_1889 (recJ)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lwa03400]
    SAMEA4504053_1889 (recJ)
DNA repair and recombination proteins [BR:lwa03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     SAMEA4504053_1889 (recJ)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     SAMEA4504053_1889 (recJ)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      SAMEA4504053_1889 (recJ)
SSDB
Motif
Pfam: DHHA1 DHH RecJ_OB Glyco_transf_4 EryCIII-like_N
Other DBs
NCBI-ProteinID: SNV05904
Position
1:complement(1986450..1988180)
AA seq 576 aa
MLIKRRQLPDSIVNLQGLPDVLNRIFIARGITEASQLDKQLKALLPFNLLKGISEASLRL
EQALRSHQRILIIGDFDADGATSTALGITALRALGAKHVEYLVPNRFEFGYGLTPAIVDV
ASKWKPDLIITVDNGIASFEGVERANQLGIDVLITDHHLPAESLPRACAIVNPNQPGCEF
PSKSIAGVGVIFYVMLALRRQLASSNWFEEMNIAEPNMASFLDLVALGTVADVVGLDQNN
RIMVNQGMQRIKQGLCREGIRALAEISGRDLTRLRETDLGFAIAPRLNAAGRLDDMSLGI
ECLITSNPQQARDFCQQLDELNQERKSIETEMKQQAMEALEKLSVIAENKKLPVALCLHD
KTWHQGVIGILAGRMKERFHRPVIAFASVSDEELKGSARSVSGLNIRDVLAAIDKDKPGL
ITKFGGHAMAAGLSIRPEVLGEFREALLNEVQKYLDVSQCEGEILTDGPLHLQEFTIETA
KLIQEAGPWGQSFAEPVFDNVFEIIDQRLVGKHHLKLTLIPEQGQETIDAIAFNVDVNLW
PNHRIKHVHVAYKLDINYYQGRSKLQLLVQALNSVT
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgcttattaaacgacggcaactaccagactcaatagtaaatctgcaaggcttgcccgat
gtattaaatcgtatatttatagcgcgtggtattaccgaagcatctcagttggacaaacaa
ctcaaggcactgttgcctttcaatcttttaaaagggatttcagaagctagtttacgtctt
gagcaagccttgcgttcgcatcagcgtattttgatcataggcgatttcgatgcagatggt
gctacttctactgctttaggaataactgctttaagagcgctaggagcaaaacatgtcgaa
tatttggttccaaaccgctttgaatttgggtatgggcttaccccagcgatagttgatgtt
gctagcaagtggaaacccgatttaattattactgtcgacaatgggattgcaagctttgag
ggagtagaaagagctaaccaattaggtatcgatgttctgataacagatcatcatcttcca
gctgaatctttacctcgggcatgtgctattgtcaatcccaatcagcctggttgtgagttt
cccagtaagtcaattgcaggagtcggagttattttctatgtcatgctggctttgagaaga
caacttgcttcaagtaactggtttgaggaaatgaatattgctgaaccgaatatggctagt
tttctagatttggttgctttaggaactgtcgctgatgttgttggcctcgatcagaataat
cgtattatggtgaatcaaggtatgcagcgaatcaagcagggcttgtgtagagaaggaata
agagctttagcagaaatttctggaagagacttgacgcgcttacgagaaactgatcttggc
tttgctatagctccgcgcttaaacgctgcaggacgattagacgatatgtctctcggaatt
gagtgcttgatcacctccaatccccaacaggcaagagatttttgtcagcagctggatgag
ttaaaccaagaacgtaaatcaatagaaacagagatgaagcaacaagcgatggaggcttta
gagaagttatccgtcattgctgaaaataaaaagttaccggttgctttatgcttgcatgac
aaaacttggcatcagggagtaattggtattttagctgggcgaatgaaagaacgatttcat
cgtcctgtgattgcatttgcttctgtgagcgatgaagaacttaaaggttctgcaagatcc
gtttcaggattaaacattagagatgttcttgctgctattgataaggacaagccaggctta
attaccaagttcggtggccatgccatggcagcaggcttaagtattaggccagaggttttg
ggtgagtttagagaagctttacttaacgaagtgcaaaaatatttagatgtttctcaatgt
gaaggggaaattctcactgatggtccgctacatttacaagagttcactatagaaacggct
aaactcattcaggaagctgggccgtgggggcaatcttttgctgaaccagtgtttgataat
gtgtttgaaattattgatcagcgactggtaggcaaacatcacttaaaactaactctcatt
ccggagcaagggcaagagaccatagatgccattgcatttaatgttgatgtaaatctttgg
ccaaaccatcgtataaagcatgtgcatgtggcttataaactggatatcaactattatcaa
ggacgaagcaaactacagttgcttgtgcaggctttgaatagtgtcacctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (5)   
   Pfam (5)   
All databases (13)   

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