KEGG   Listeria weihenstephanensis: UE46_09440
Entry
UE46_09440        CDS       T05637                                 
Name
(GenBank) recombinase RecJ
  KO
K07462  single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lwi  Listeria weihenstephanensis
Pathway
lwi03410  Base excision repair
lwi03430  Mismatch repair
lwi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lwi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    UE46_09440
   03430 Mismatch repair
    UE46_09440
   03440 Homologous recombination
    UE46_09440
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lwi03400]
    UE46_09440
DNA repair and recombination proteins [BR:lwi03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    RecJ
     UE46_09440
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     UE46_09440
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      UE46_09440
SSDB
Motif
Pfam: ssDNA-exonuc_C RecJ_OB DHH DHHA1 DUF34_NIF3
Other DBs
NCBI-ProteinID: AQY51254
UniProt: A0A1S7FUX4
Position
complement(1950409..1952772)
AA seq 787 aa
MIHSKYKWQVETADETAMQQVAEELKCTLPMAELFARRKVTTAGQLDKFLNPDKYEAYDP
FLFAEMDKAVARIKQAIEAGENILVYGDYDADGVTSVTVLLKTLRNLGANADFYIPNRFL
EGYGPNSAAFTQAKESGVDLLITVDNGISALDVMAHAKEIGLDVIVTDHHEAKETMPEAV
AVIHPRHPESNYPFPDLAGVGVAYKLAHALLGEEPTELLDLVAIGTVADLVSLTDENRLF
VQKGLRVLRENANIGVAALAKLASAKLSEATEETIGFMIAPRLNAVGRLGPADPAADLLL
TDDPEEAVFLAEEIDEANKERQTIVSQITEEALAMIEADFMDEGNEVLVIGKVGWNPGVV
GIVASKLVDRFARPVIVLGIDEVTGIAKGSGRSIEAFHLYKALDANKELLKAFGGHPMAA
GMTLDAADVEALRKNLSQLARETLAPEDFVSILRVEETIPVETVTVEFIAQLNKLAPFGT
DNPKPIFAFEGVRLAGTKRIGADKTHLKTALTADSGASMDAVGFGSGELVEKISPMARVD
VAGELSINEWNNMRKPQLRIVDLQIGHWQLFDVRSRSEWEKLLESRTTTDKVFVCFKDGT
KEKLLAQNENLICTQIQTETDLVETTTKDLIFADIPDDVGLLEAIVMNTEADRIYLHVAA
ENGNAIASMPSRQHFAQLYAVLKKHQPFPLAQNMSRLSKQFSWTNDQIDFMLQVFFDLNF
ATIEDGVIRLNDVKEKRNLEDSEIYKARVYRIALEQKLLYSNYNELYEWIEKLMNSKGNS
ILEEIVK
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgattcattctaaatataaatggcaggtcgaaacggccgatgaaacagcgatgcaacaa
gtggcggaagagctgaaatgtacgttaccgatggcagagctttttgcacggcgcaaggtg
acgacggctggtcaattggataaatttttaaatccggataagtatgaggcgtatgatcca
tttttatttgcagagatggacaaggctgttgcacggattaagcaagcgattgaagctggg
gaaaatattttggtatacggtgattacgatgcagatggtgtgacgagtgtaacggtgttg
ctaaaaacattgcgaaaccttggcgctaatgcagatttttatattcctaatcggttcttg
gaaggatatggtccgaatagcgcggcatttacgcaggcgaaagaatctggcgttgattta
ttgattactgtggacaatgggatttcagcgctggacgttatggcgcacgcgaaagaaatc
gggcttgatgtgatcgtgacggatcatcatgaggcgaaggagacgatgcctgaggcggtc
gctgtgatccatccgcggcatccagagtccaattacccatttcctgatttagcgggtgta
ggcgtggcttacaagcttgctcacgcgctgttaggtgaggaaccgacagaattgctcgat
ttagtggcgattggaacggtggcagatcttgtttctctgacagatgaaaaccgcctattc
gtgcaaaaaggattgcgcgttcttcgtgaaaatgccaatattggtgtggcggcacttgct
aaactggcgagcgctaagttatctgaggcgacggaagaaacgatcggctttatgattgcg
ccacggttgaatgctgttggtcgtttaggtcccgcagatccggcggctgatcttttacta
acggatgatcccgaggaagcggtttttctagcagaggagattgatgaggcgaataaagag
cgtcaaacgattgtatctcaaattacggaagaagctttggcgatgattgaagctgatttt
atggatgagggcaatgaggtgcttgtgatcggtaaagtgggctggaatccaggggttgtc
gggattgtggcgtctaaactggtcgatcgtttcgcgcgacctgtgatcgtgcttggaatc
gatgaagtgacgggtatcgcgaaagggtctggacggagtatcgaagcgtttcacctgtac
aaggcgcttgatgctaataaggaacttttaaaagcgtttggcggtcacccgatggcggct
ggtatgacgcttgatgcggcggatgttgaagcgttacgcaaaaatttatcgcaattagcg
cgggaaacattggctcctgaagattttgtgtccattttgcgggtagaagaaacgattcct
gttgagacggttaccgttgaatttatcgcccagttaaataagttggcgccatttgggacg
gacaatccaaaacctatttttgcgtttgaaggggttcgcttagcgggcacaaagcggatt
ggtgcggataaaacacatttgaaaacagcgctgacagctgattctggcgcttcgatggat
gcagttggatttggcagcggcgaacttgttgagaaaatttctccgatggcaagagtagac
gttgctggggaactgtccatcaacgagtggaataacatgcgaaaaccgcaacttcgtatt
gttgatttacagattggacattggcaattattcgatgttcgcagccgttctgaatgggaa
aaactattggaatctagaacgacgacggataaagtttttgtttgttttaaagatggcacg
aaagaaaaattactagctcagaatgagaacttaatctgtacgcaaattcagacggaaacg
gacttggtcgagacaacaacgaaagaccttatttttgcggatataccagatgatgtgggc
ttgcttgaggcgattgtgatgaatacagaagcggatcggatttacctgcacgttgcggct
gaaaatggtaatgcgattgcgtcgatgccgagtcgtcaacattttgcgcaactttatgcg
gtgctcaaaaaacaccaacctttcccactcgcgcagaatatgtcgcggctttccaaacag
tttagctggacgaatgatcaaattgattttatgttacaggtgttttttgatctaaatttt
gctacaatagaggatggcgtgattagattaaatgatgtcaaagaaaagcgtaacttggaa
gattcggagatttataaggctcgggtataccgaattgcgttggaacagaaattactctat
tcaaactacaatgaactgtacgaatggattgagaagctgatgaattcaaaggggaattca
attttggaggaaatagtaaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (14)   

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