KEGG   Leifsonia xyli subsp. xyli CTCB07: Lxx11820
Entry
Lxx11820          CDS       T00190                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lxx  Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx03030  DNA replication
lxx03430  Mismatch repair
lxx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lxx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Lxx11820
   03430 Mismatch repair
    Lxx11820
   03440 Homologous recombination
    Lxx11820
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lxx03032]
    Lxx11820
   03400 DNA repair and recombination proteins [BR:lxx03400]
    Lxx11820
Enzymes [BR:lxx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Lxx11820
DNA replication proteins [BR:lxx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Lxx11820
DNA repair and recombination proteins [BR:lxx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Lxx11820
SSDB
Motif
Pfam: RNase_T Tenui_N
Other DBs
NCBI-ProteinID: AAT89028
UniProt: Q6AF17
Position
complement(1216073..1216756)
AA seq 227 aa
MSWHHELGVFDLETTGVDVETARVVTAHIGLLDEHGEIVHGRSWLLDPGVEIPAEASAVH
GISTELAREKGMDAARGIAGIVDQLRRLFARSVPVVAYNAPYDFSLLDREARRHGIEPLH
SPGPIIDPLVIDRAVDKFRPGKRTLTVTADHYGIVLTDAHDAGADAIAAGRLAQALARRH
TEHLAIDAAELHRRQIGWCREQVADFQEYMRRVRDPEFTASGDWPLL
NT seq 684 nt   +upstreamnt  +downstreamnt
atgagctggcaccacgaactcggtgtgttcgatctggagaccacgggcgtcgacgtggag
accgcccgcgtggtcacggcgcacatcggcctgctcgacgagcacggcgagatcgtccac
ggccgctcctggctgctcgaccccggtgtggagatccccgccgaagcctccgcagtccac
ggcatcagcaccgagctggcgcgtgagaaggggatggacgccgctcgcgggatcgcgggg
atcgtggatcagctgcgccggctcttcgcccgcagcgtccccgtcgtcgcctacaacgca
ccctacgatttcagtctcctcgaccgcgaggcacggcgtcacggaatcgagccgctccac
tcccccggccccatcatcgacccgctggtcatcgaccgcgccgtcgacaagttccggccc
ggcaagcgcaccctcactgtcaccgcggaccactacggcatcgtcctcactgacgcccac
gacgcgggagcggacgccatcgcggccggtcgcctggcacaggcgctcgcacgccggcac
accgagcatctggcgatcgacgcggccgagctgcaccggagacagatcggttggtgccgg
gagcaggtggcggattttcaggagtacatgcgccgagtgcgcgatccggagttcactgcg
tcgggagactggccgctgctctga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (20)   

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