KEGG   Leifsonia xyli subsp. xyli CTCB07: Lxx16640
Entry
Lxx16640          CDS       T00190                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
lxx  Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx03030  DNA replication
lxx03430  Mismatch repair
lxx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lxx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Lxx16640
   03430 Mismatch repair
    Lxx16640
   03440 Homologous recombination
    Lxx16640
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lxx03032]
    Lxx16640
   03400 DNA repair and recombination proteins [BR:lxx03400]
    Lxx16640
Enzymes [BR:lxx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Lxx16640
DNA replication proteins [BR:lxx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Lxx16640
DNA repair and recombination proteins [BR:lxx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Lxx16640
SSDB
Motif
Pfam: RNase_T Rv2179c-like AlkZ-like BtpA
Other DBs
NCBI-ProteinID: AAT89439
UniProt: Q6ADV7
Position
1730151..1730729
AA seq 192 aa
MTLDFTAIDFETANSSAASACSVGLVKVRDGRVVDRSGWLIQPPAGHDEFHEWNVRIHGV
HPADIAGAPGWADQLADLVEFCEDDALVAHNAGFDMGVIRAACAATRIACPDYRYLCSLQ
VARRTCLESYRLPAAALAAGFEDFHHHDALADAEACAAIAIHAARRHGAATVSDLAALTG
TRLYRIGAPAAS
NT seq 579 nt   +upstreamnt  +downstreamnt
gtgaccctggatttcaccgcgatcgacttcgagacagcgaattcctcggcagcgtcggcc
tgttcggtcgggttggtcaaggtcagggatgggcgggtcgtcgaccgatcggggtggctc
atccagccgccggccgggcacgacgagttccacgagtggaacgtccgcatccacggcgtc
caccccgcggatatcgctggggcgccgggatgggccgaccagctggccgatctggtggag
ttctgcgaagacgacgctctcgtcgcccacaacgcgggcttcgacatgggcgtcatccgc
gccgcgtgcgcggcaacccgcatcgcctgcccggattaccgctatctgtgcagccttcag
gtggcccgccgcacgtgcctggagtcctaccggctgccggccgccgcgctggctgcgggc
ttcgaggacttccaccaccacgacgcgctcgccgacgccgaggcgtgtgccgcaatcgcg
atccacgcggcccggcggcacggagccgcgacagtgtccgacctggccgcgctgacgggt
acgcgtctgtaccgcatcggtgcgccggccgcgtcgtag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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