KEGG   Leifsonia xyli subsp. xyli CTCB07: Lxx21400
Entry
Lxx21400          CDS       T00190                                 
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase
  KO
K04567  lysyl-tRNA synthetase, class II [EC:6.1.1.6]
Organism
lxx  Leifsonia xyli subsp. xyli CTCB07
Pathway
lxx00970  Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:lxx00001]
 09120 Genetic Information Processing
  09122 Translation
   00970 Aminoacyl-tRNA biosynthesis
    Lxx21400 (lysS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01007 Amino acid related enzymes [BR:lxx01007]
    Lxx21400 (lysS)
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lxx03016]
    Lxx21400 (lysS)
Enzymes [BR:lxx01000]
 6. Ligases
  6.1  Forming carbon-oxygen bonds
   6.1.1  Ligases forming aminoacyl-tRNA and related compounds
    6.1.1.6  lysine---tRNA ligase
     Lxx21400 (lysS)
Amino acid related enzymes [BR:lxx01007]
 Aminoacyl-tRNA synthetase
  Class II (A)
   Lxx21400 (lysS)
Transfer RNA biogenesis [BR:lxx03016]
 Eukaryotic type
  Aminoacyl-tRNA synthetases (AARSs)
   Multi-aminoacyl-tRNA synthetase complex (MSC)
    Lxx21400 (lysS)
 Prokaryotic type
   Other AARSs
    Lxx21400 (lysS)
SSDB
Motif
Pfam: tRNA-synt_2 tRNA_anti-codon tRNA-synt_2d
Other DBs
NCBI-ProteinID: AAT89834
UniProt: Q6ACQ9
Position
complement(2201985..2203499)
AA seq 504 aa
MTDTPTETPELTDEEISEQKAVRLGKRERLIAGAGDLGGGAYPVRLPVTTTIPEVREKWG
HLAADEVSAETVGVAGRVVFLRNTGKLCFAVLQSGDGSRIQAMVSLAEVGEESLARWKEF
VDLGDHVFVSGEVISSRRGELSIMAVGWQIASKAILPLPNLHNELSEETRVRSRYLDLIA
RDRARRNVLDRAAAVASLRTTFADSGFIEVETPMLQVMHGGASARPFVTHSNAFDTELFL
RIAPELYLKRAVVGGIDRVFEINRNFRNEGADSTHLPEFAMLEAYQAYGDYNTIADLTQA
LIQNAAVAVSGSHVVTWADGTEYDLSGDWDRIRMYDSLSEALGEEITPETPLQRLRELAA
EAGVEIEHPLPGKYVEELWEHHVKSGLVRPTFVMDFPVDTSPLVRVHRSLPGVVEKWDLY
MRGFELATGYSELVDPVVQRERFVEQARLAAAGDDEAMRLDEEFLRALEFGMPPTGGMGM
GIDRLLMALTGLGIRETILFPLVK
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgaccgatacgccgacggaaacccctgagctcaccgacgaggagatcagcgagcagaag
gccgtccggctcggcaagcgcgagcggctcatcgccggtgccggcgacctcggtggcggt
gcgtacccggtacggctcccggtgacgacgacgattccggaggtacgcgagaagtggggg
cacctcgccgcggacgaggtctctgcggagaccgtgggtgtcgcgggtcgcgtcgtcttc
ctccggaacaccggcaagctgtgcttcgctgtgcttcagtcgggagacggttcgcgcatt
caggcgatggtgtcgctggccgaggtcggcgaggagtcgctggcgcgctggaaggagttc
gtggacctgggcgatcatgtcttcgtctcgggcgaggtcatctccagccgtcgtggcgag
ctgtcgatcatggccgtgggctggcagatcgcctcgaaggcgatcctcccgctcccgaac
ctccacaatgagctgagcgaagagacgcgcgttcgctcccgttacctcgacctgatcgcg
cgcgatcgagcccgccggaacgtcctcgatcgcgccgccgccgtggcgagcctccgcacg
accttcgccgacagcggttttatcgaggtcgagaccccgatgctgcaggtcatgcacggc
ggtgcctcggcccgtccgttcgtgacccactcgaacgccttcgacacggagctctttctc
cgcatcgcgccggagctctacctcaagcgcgccgtcgtcggcggcatcgaccgggtgttc
gagatcaaccgtaacttccgcaacgagggagcggattccacgcacttgccggagttcgcc
atgcttgaggcgtaccaggcgtacggcgactacaacaccatcgccgacctgacgcaggcg
ctcatccagaacgcggcggtcgccgtctccggttcgcatgtcgtcacctgggcagacggg
accgagtacgacctcagcggcgactgggaccgcatccggatgtacgacagcctctcggag
gcgctcggcgaggagatcaccccggagaccccgctgcagcggctgcgcgagcttgcggcc
gaggccggtgtcgagatcgagcacccactgcccggcaagtacgtggaggaactctgggag
catcatgtcaagagcgggctcgtccgcccgacgtttgtcatggacttccctgtggacacc
agcccgctcgtgcgtgtacaccgttcgctcccgggcgttgtcgagaagtgggacctctac
atgcgcggcttcgagctggctaccggctactcggaactggtggatccggtcgtccagcgc
gaacgctttgtcgagcaggcgcgattggccgctgcgggcgacgacgaggcgatgcgcctg
gacgaggagttccttcgcgcgctcgagttcgggatgccgcccaccggcgggatgggaatg
ggcatcgaccgcttgctgatggccctgaccggcctcggcattcgtgagaccatcctgttc
ccgctcgtcaagtag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (13)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (34)   

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