KEGG   Lysinibacillus sp. B2A1: C3943_21450
Entry
C3943_21450       CDS       T05347                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
lyb  Lysinibacillus sp. B2A1
Brite
KEGG Orthology (KO) [BR:lyb00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lyb03021]
    C3943_21450
Transcription machinery [BR:lyb03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C3943_21450
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF Chordopox_A35R
Other DBs
NCBI-ProteinID: AVK85876
UniProt: A0A2S0JQX6
Position
complement(4393199..4393738)
AA seq 179 aa
MIDSNNLESRIVEIYNLYYLDVYRFLICFSGNQNDAEDLTQEVFIRVLKSLTNFNGKYNL
KTWIFSIAKHVAVDHYRKKRFVSLFKDVFFNQLSSNEKKPDEVFEVTELKRCIHEAIAKL
KPNYRAVMILRGISECSIKETSEILQCSEAKVKVDYHRASKELKRKLNIDIEGGLTNAK
NT seq 540 nt   +upstreamnt  +downstreamnt
ttgattgattcgaataacttggaatcaagaatcgttgaaatttacaatttgtattattta
gacgtgtacagatttcttatttgtttttcgggaaatcaaaatgatgcggaggatttaacg
caagaagtatttattcgggtgttaaaaagcttaacaaattttaatggtaagtataattta
aagacatggattttttcaatcgcaaaacatgttgcagttgatcattataggaaaaaacgg
tttgtctctttatttaaagatgttttttttaatcaattgtcctcaaatgaaaagaagcca
gatgaggtatttgaagtaacggaattaaaacgatgtatacatgaggccattgcaaaatta
aaacctaattacagagcggtaatgattcttcgaggaatttctgaatgctctattaaagaa
acctccgagattctacaatgtagtgaagctaaagtgaaagttgattatcacagagcttca
aaagagttgaaaagaaaactgaatattgacatagagggaggtttgacaaatgcaaaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system