KEGG   Lysobacter sp. TY2-98: DWG18_04195
Entry
DWG18_04195       CDS       T05586                                 
Name
(GenBank) DNA polymerase III subunit alpha
  KO
K02337  DNA polymerase III subunit alpha [EC:2.7.7.7]
Organism
lyt  Lysobacter sp. TY2-98
Pathway
lyt03030  DNA replication
lyt03430  Mismatch repair
lyt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:lyt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    DWG18_04195
   03430 Mismatch repair
    DWG18_04195
   03440 Homologous recombination
    DWG18_04195
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lyt03032]
    DWG18_04195
   03400 DNA repair and recombination proteins [BR:lyt03400]
    DWG18_04195
Enzymes [BR:lyt01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     DWG18_04195
DNA replication proteins [BR:lyt03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     DWG18_04195
DNA repair and recombination proteins [BR:lyt03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     DWG18_04195
SSDB
Motif
Pfam: DNA_pol3_alpha DNA_pol3_finger PHP HHH_6 tRNA_anti-codon Fox-1_C
Other DBs
NCBI-ProteinID: AXK71568
UniProt: A0A345ZIJ3
Position
complement(865594..869112)
AA seq 1172 aa
MTSRFVHLHLHSEYSLADSTIRIGELIKRCVALGQPAVAITDINNVFAAVKFYKAAEAAG
IKPIIGADVALADGNESPSRMTLLCRDRQGYLTLSRLLTRMWMEGHRADGVAMRPDWLRE
DNGSLFAIAGRDSLAAQLAGGGRHDLAEAWLVDWKDVLGDRLHLELTRTGRKGEDAFNAF
ALHASSLREIPVIATNDVRFVDEAGYEAHEARVCIATGRVLDDPKRPRDYSPQQFLRSGE
EMDDLFADVPDAIANAHALAMRCNVEMKLGEYALPAFPVPSEHTIESWLRNTARDGLAKR
LEKVPPSDGRTTNEYTSRLETELDVIIKMGFPGYFLIVADFINWGKQQGIPVGPGRGSGA
GSLVAWALGITDLDPLPYDLLFERFLNPERVSMPDFDIDFCMDRRDEVIDYVARKYGRDR
VSQIITYGTMAAKAAVRDCGRVLGHPYGMVDGIAKLIPNTLGIGLEDALGQSDASKKDPE
LASQELITRYRAEDDVRDLMDLALSLEDLTRNAGKHAGGVVIAPSPLSDFCPLFAEHDEG
GRGRNPVTQFDKDDVEAVGLVKFDFLGLRTLTIIDWAVKAINKRRAKEGGEPLDITTLPL
DDAKAYEVFARGDTVAVFQFESRGMRELLKRAQPDRFDDLIALVSLYRPGPMDLIPDFIE
RKHGRQDVVFPHPLLEPVLAPTYGVVVYQEQVMQTAQILGGYSLGGADLLRRAMGKKKPE
EMAKERVKFEAGAKEHHGIEPRVSGPIFDLLEKFAGYGFNKSHAAAYALVSYQTAWLKAH
YPAEFMAAVLSSDMDNTDKVTGFLDEARAIGMTVLPPDVNESAYMFEARTPDTIRYGLGA
VKGVGRGVCEAIVEARRAGPFTDLLDLCQRADDGKLNRRALEAMAQAGALDAIGKNRASL
FLQIPEVLRATDQLAKETAAGQVSLFGGFDTAAPALHLDLPECDEWPVGKLLEHERETLG
HYLSGHPFDPHREDVHALIGFDLGDLERIWAGRPDSGRGGWRPEMETTVAGLVVGFRKKG
DSQVFVQIEDGKGRLECAFFAETYAEHASLIGRDKLLVVQGGLREDAFSGGFALKAQRCW
DFAQVCGRHAQRLSVRLDLRQPGTMARVEAVLAAHRPGPTPLRLHLLLDGTHGMVDLDGA
QGVRLSPDLMEALRATPGVVTVKASLSKPWAH
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgacgtcccgcttcgttcacctccatctccacagcgaatactcgctcgccgactcgacg
atccgtatcggcgagttgatcaagcgatgcgtggcgttgggccaaccggcggtggcgatc
accgacatcaacaacgtcttcgccgccgtgaagttctacaaggcggcggaagcggcgggc
atcaagcccatcatcggcgccgacgtcgcgctcgccgacggcaacgagtccccctcgcgc
atgacgctgctctgccgcgaccgccagggctacctcacgctgtcgcgcctgctcacgcgc
atgtggatggaaggccatcgcgccgatggcgtcgccatgcgtccggactggctgcgcgag
gacaacggcagcctgttcgcgatcgcgggtcgcgacagcctggccgcgcagctcgctggc
ggcggccgccacgatcttgccgaagcctggctggtcgactggaaggacgtgctgggcgac
cggctgcatctcgaactcacgcgcaccggccgcaagggcgaggatgcgttcaacgcgttc
gcgctgcatgcgtcgtcgctgcgcgagattccggtcatcgcgaccaacgacgtccgcttc
gtcgacgaagccggctacgaagcgcacgaggcgcgcgtctgcatcgcgaccggccgcgtg
ctcgacgatcccaagcgtccgcgcgactacagtccgcagcagttcctgcgctccggcgag
gagatggacgatctcttcgccgacgtgcccgacgcgatcgcgaatgcgcatgcgctggcc
atgcgctgcaacgtcgagatgaagctcggcgaatacgcgctccccgcgtttccggtgccg
agcgaacacaccatcgagtcgtggctgcgcaacaccgcgcgcgacggtctggccaagcgt
ctcgagaaggtgccgccgtcggacggccgcaccacgaacgagtacacgtcgcgtctggag
accgagctcgacgtcatcatcaagatggggtttcccggctacttcctgatcgttgcggac
ttcatcaattggggtaagcagcagggcattcccgtcggtccgggtcgtggttccggtgcg
ggttcgctggttgcgtgggcgctcggcatcaccgatctcgatcccctgccctacgacctg
ctgttcgagcggttcctcaatcccgaacgcgtgtcgatgcccgacttcgacatcgacttc
tgcatggatcgccgtgacgaagtcatcgactacgtcgcgcgcaagtacggccgcgaccgc
gtctcgcagatcatcacgtacggcacgatggcggcgaaggcggcagtgcgcgactgcggc
cgcgtgctcggccatccgtacggcatggtcgacggcatcgcgaagctgattccaaacacg
ctcggcatcggtctcgaagacgccctcggtcagtcggatgcatcgaagaaggatcccgag
ctcgcgtcgcaggaactgatcacgcgttaccgcgccgaagacgacgtgcgcgacctgatg
gatctcgcgctctcgctcgaggacctgacgcgcaacgccggcaaacacgccggcggcgtg
gtgatcgcaccgtcgccgttgagcgacttctgcccgctgttcgccgaacacgacgaaggc
ggccgcggccgcaatccggtcacgcagttcgacaaggacgacgtcgaagccgtcggcctg
gtgaagttcgacttcctcggcctgcgcacgctcacgatcatcgattgggcggtgaaggcg
atcaacaagcggcgcgcgaaggaaggcggcgaaccgctggacatcaccacgctgccgctc
gacgacgcgaaggcgtacgaggtgttcgcgcgcggcgataccgtcgcggtgttccagttc
gaatcgcgcggcatgcgcgagttgctcaagcgcgcgcagcccgaccgcttcgacgacctc
atcgcactcgtgtcgctgtaccgcccgggcccgatggacctgatcccggatttcatcgag
cgaaagcacggacgccaggacgtggtcttcccgcatccgctgctcgaaccggtgctcgcg
cccacgtacggcgtcgtcgtctaccaggagcaggtcatgcagaccgcgcagatcctgggc
ggctattcgctgggcggcgcggacctgctgcgtcgcgcgatgggcaagaagaagcccgag
gagatggcgaaggaacgcgtcaagttcgaagccggtgcgaaggaacaccacggcatcgaa
ccgcgtgtgtccgggccgatcttcgacttgctcgagaagttcgcgggctacggtttcaac
aagtcgcacgccgccgcgtatgcgctggtgtcgtaccagacggcatggctgaaggcgcac
tacccggccgagttcatggccgcggtgctgtcgtcggacatggacaacaccgacaaggtg
acgggcttcctcgacgaggcacgcgccatcgggatgacggtgctgccgccggacgtcaac
gaatcggcctacatgttcgaagcacgcacgccggacacgatccgctacggcctcggtgcg
gtgaaaggcgtgggacgcggcgtctgcgaagcgatcgtcgaagcacgccgcgccggtccg
ttcaccgatctgctcgacctctgccagcgtgccgacgacggcaagctcaatcgccgcgcg
ctcgaagcgatggcgcaggccggcgcgctcgatgcgatcggcaagaaccgcgcgagcctg
ttcctccagattcccgaggtgctgcgcgccaccgaccagctggcgaaagaaaccgccgcg
ggacaggtctcgctgttcggcggtttcgataccgccgcgcccgcgctgcatctcgacctg
cccgaatgcgacgagtggccggtcggcaagctgctcgaacacgagcgcgagacgctcggc
cactacctcagcggccatccgttcgatccgcaccgcgaggacgtgcacgcgctgatcggc
ttcgacctcggcgatctcgaacgcatctgggcggggcgccccgacagcggtcgcggcggc
tggcgtccggaaatggagacgaccgtcgcgggcctcgtcgtcggcttccgcaagaagggc
gactcgcaggtcttcgtgcagatcgaggacggcaagggtcgcctggaatgcgcgttcttc
gccgagacctacgccgaacatgcgtcgctgatcgggcgcgacaagctgctcgtcgtgcag
ggcggcctgcgcgaggatgctttctccgggggcttcgcgctcaaggcgcaacgctgctgg
gatttcgcgcaggtctgcggacgccatgcgcagcgtctgtcggtgcgcctcgacttgcgc
cagccgggcacgatggcgcgtgtcgaagcggtgctggccgcgcaccgcccgggccccacg
ccgctgcgcctgcacctgctgctggacggcacgcacggcatggtggacctcgacggcgcg
cagggcgtgcgcctgagccccgacctcatggaggcgttgcgggcgacacccggcgtcgtc
acggtgaaagcctcgctctcgaagccctgggcgcactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (19)   

Download RDF
DBGET integrated database retrieval system