KEGG   Lysinibacillus sp. 2017: DCE79_05015
Entry
DCE79_05015       CDS       T05455                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
lyz  Lysinibacillus sp. 2017
Pathway
lyz02020  Two-component system
lyz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:lyz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    DCE79_05015 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    DCE79_05015 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lyz03021]
    DCE79_05015 (rpoN)
Transcription machinery [BR:lyz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     DCE79_05015 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID AMPK_alpha_AID HTH_1 HTH_28
Other DBs
NCBI-ProteinID: AWE06796
UniProt: A0A2S1GZH0
Position
1121586..1122893
AA seq 435 aa
MKRGMLMQMDIQISPQIKQIMTMDTIFHLEILQLTNDELATMIADKALENPLLLVEDHFN
RFSVDYSNLKRYDNRIEPFKVKQESVVEYLWELMPLQIELPNIQERVLRFLMEHLDEHLF
LQVEISEVCKKFSISEEEIIECIELLQSFGPFGIASKNSKHFLELQVNLDEQAPPFALLF
IQQELTAIANLQMSYLMKKYKMTKKEVLTTIAYIKGLQPFPKMPTLNEPSMFIIPDLQIS
LVAGQWIIEINNQLLPKVSINEGYIALLKEESLIKDYVEQQLKQAQLLVDGIEERKKTIY
RIMNWLIQKQRYFLEKGQSGLIPLRLADAARELNLHESTISRAIRNKYVRTPFGMLMLKE
FFPKGITYTENPNLTSDRIKQRIQQLIAGECSSKPLSDQQLVEFLKKEQILISRRTVAKY
RESLTIPNSTKRAYA
NT seq 1308 nt   +upstreamnt  +downstreamnt
atgaaacgggggatgcttatgcaaatggacatccaaatttcacctcaaataaagcaaatc
atgacaatggatacgatctttcatttagagatactccaattaacaaatgacgagttggca
acaatgattgccgacaaagcgttagaaaaccctttattgctagtagaggatcattttaat
agattttcagtagattattccaatctaaaaagatatgacaatcgaattgaacctttcaaa
gtaaagcaagaaagcgttgtagagtatttatgggagttaatgcctttacaaatcgaacta
ccaaatattcaagaacgagtacttcgttttttaatggaacatcttgatgaacatttattt
ttacaggtggaaataagtgaagtatgtaaaaaattttcgatttccgaggaagaaataata
gaatgtattgaattgcttcaaagctttggtccgtttggtattgcatcaaaaaatagtaaa
cactttttggaattgcaagtgaatttagatgaacaggcacccccgtttgccttattattt
attcaacaagagttaacggctattgcaaatcttcaaatgtcttaccttatgaagaaatat
aaaatgaccaaaaaagaagtattaacaacgattgcttatataaagggattgcagccattt
ccaaaaatgccaacattaaatgaaccttctatgttcatcattccggatttacagatttct
ttggtcgcaggacaatggataattgaaataaacaaccagctgctgcctaaagtatcaata
aatgaaggttatattgcattattaaaagaggaatctcttataaaagattatgttgaacaa
cagttaaagcaggcacagttattggtagatggcatcgaagagcgaaaaaagacaatttat
cgaatcatgaattggttaattcaaaaacaacgctactttttagaaaagggtcaaagtgga
ctaatacctctacgattagcagatgcagcaagggaattaaatttacatgaatcaacgatt
agtcgcgccatacgtaataaatatgtaagaacgccgtttgggatgcttatgttaaaagaa
tttttcccgaaaggcattacttatacagaaaatccgaacttgacgagtgataggataaag
caacgtatacaacagttaatagcaggagagtgttcatcaaagccgctatctgaccaacaa
cttgtcgaatttttgaaaaaggagcaaatcctaatttcgaggaggactgttgcgaaatat
cgcgaaagcttaacgattccaaattcaacaaaaagagcatatgcatga

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