KEGG   Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300: MMASJCM_3565
Entry
MMASJCM_3565      CDS       T03694                                 
Name
(GenBank) RNA polymerase sigma-54 factor RpoN
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mabl  Mycobacteroides abscessus subsp. massiliense CCUG 48898 = JCM 15300
Brite
KEGG Orthology (KO) [BR:mabl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mabl03021]
    MMASJCM_3565
Transcription machinery [BR:mabl03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MMASJCM_3565
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_23
Other DBs
NCBI-ProteinID: BAP98341
Position
complement(3566730..3567437)
AA seq 235 aa
MACLERPMSVPIRMVGVATERTAVTSMDSAAELPGLVHVETEAERVARFERDALPLLDQL
YGAALRMTRNPADAEDLVQETMVKAYAGFGTFKEGTNLKAWLYRILTNTYINIYRKKQRQ
PAEYPTEEITDWQLAANAEHTSTGLRSAEIEALDGLPDDEIKEALNKLPEEFRMAVYYAD
VEGFPYKEIAEIMDTPIGTVMSRLHRGRRQLRDLLSEVAKDRGFLRNNELAEGRA
NT seq 708 nt   +upstreamnt  +downstreamnt
atggcgtgcctcgaacgtccgatgtcggtgccgatccgtatggtcggtgtcgctaccgaa
aggaccgccgtgacaagcatggacagcgctgcagaactcccgggtctggttcacgtcgaa
accgaggccgagcgggtcgcgcggttcgaacgtgacgcgttaccgctgctggaccagctc
tacggcgcggccttacggatgaccagaaatcccgcggacgccgaggacctggtgcaagag
acgatggtcaaggcatatgccgggttcgggaccttcaaagagggcaccaatctcaaggcg
tggctgtaccggattctgaccaacacgtacatcaatatttaccgcaagaagcagcgtcag
cctgcggagtatccgaccgaggagatcactgactggcagctggcggcgaatgccgagcac
acctccacggggctgcggtcggcggagatcgaagcacttgatgggttacctgacgacgaa
atcaaggaagcgttgaataagctgccggaagaattccggatggccgtgtactacgcggac
gtcgaaggcttcccctataaggagatcgccgagatcatggacaccccgattggcactgtt
atgtcgcggttgcaccgcggccgtcgtcagctgcgcgacttgctgtccgaagtggccaag
gaccgcggattcctgcgcaacaatgagttggcggagggccgggcatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (4)   
   Pfam (4)   
All databases (10)   

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