KEGG   Marinobacter adhaerens: HP15_2442
Entry
HP15_2442         CDS       T01922                                 
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mad  Marinobacter adhaerens
Pathway
mad02020  Two-component system
mad02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mad00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HP15_2442
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HP15_2442
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mad03021]
    HP15_2442
Transcription machinery [BR:mad03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HP15_2442
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: ADP98206
UniProt: E4PHR8
Position
2579904..2581430
AA seq 508 aa
MVMKASLQLKLGQSLTMTPQLQQAIRLLQLSTLDLQQEIQQALESNPMLETSEDDDQTDT
STESDEREANAAESAAETTPEPSSDWDESENGPDWSSENEIPDNIPDDLPVDTAWDDIYQ
SAPAPAARNDDENDHDFETRNSPTETLQDHLEWQLNLTPLSERDQAIAHALMDAVDERGY
LTSPLEEIHAGLLDENEEDPLELDEVEAVLHRLQHFDPPGVFARDLQECLLIQLNQLPPD
TPWLAQARLVITHYINLLGNRDYAQLLRRSRLKEDQLREVLALITGLNPRPGDVIDRAEP
DYVIPDVIVRKHNGRWRVELNPEIAPRIRVNASYASLIRRADSSADNTYLRDQLQEAKWF
IKSLQSRNETLLKVATRIVEHQQGFLDYGEEAMKPLILSDIAQAVEMHESTISRVTTQKY
MHTPRGIFELKYFFSSHVSTDEGGECSSTAIRAMIKKLIAAETPKKPLSDSKIAAMLGEQ
GIKVARRTVAKYREAMHIPPSNERKRLV
NT seq 1527 nt   +upstreamnt  +downstreamnt
atggttatgaaagcctccttacagttaaagctgggtcagagcctgaccatgacaccccag
ctgcaacaggcgatccggcttctccagctatctaccctcgacctccaacaggaaatccag
caggcactggaatccaaccccatgctggagacatccgaggacgacgatcagaccgacacg
tccaccgagagtgacgagcgcgaggccaatgcggccgagtctgctgccgagaccacgccg
gaaccgtccagcgactgggacgaatccgagaacggcccggactggtcgtcggaaaacgag
attccggataacattccggacgatctgccggtcgacacggcctgggatgacatctaccag
tccgcccctgccccggcagcccgcaacgacgatgaaaacgatcacgatttcgagacccgc
aactcgcccaccgagacccttcaggatcacctggaatggcagctcaacctgactcccctg
agtgagcgggaccaggccattgcccacgccctgatggacgccgtggacgagcggggctat
ctcaccagccccctggaagaaatccacgccgggctgctggacgagaacgaagaagacccc
cttgaactggatgaagtggaagccgtcctgcatcgcctccagcacttcgatccccctggc
gtgtttgcccgggatttgcaggaatgcctgctgatacagcttaaccagctgccgccggac
acaccctggctcgcccaggcacgcctggtgatcacccactacatcaacctgctgggcaac
cgggactacgcccagctattgcgtcgcagccgcctgaaggaagatcaactcagggaagtc
ctggcgttgattaccggcctcaatccgcgcccgggcgacgtgattgatcgcgccgagccc
gactacgtgattccggatgtcatcgttcgcaagcacaatggccgctggcgtgttgagctg
aatccggaaattgcaccgcgcatccgggtaaatgccagctatgcttcacttataaggcgt
gcagacagcagtgcagacaacacctacctccgcgatcagttgcaggaggccaagtggttt
atcaagagcctgcagagccgcaatgagaccctgctgaaagtagcgacccgtattgtcgag
caccagcagggtttcctggattacggcgaggaagcaatgaagccgttgattctctcggac
attgcccaggcggtggaaatgcatgaatcaacgatttcacgggtaaccactcagaaatac
atgcatacccccaggggtattttcgaactgaaatatttcttctccagccatgtcagcact
gatgagggcggagaatgctcttccacggccatacgcgcgatgatcaagaagctgattgcc
gccgaaacacccaaaaagccgttgagcgacagtaaaattgcagccatgctaggggaacag
ggtatcaaggttgcgcgacgcaccgttgccaagtaccgggaggccatgcacattccgccg
tccaacgaacgcaagcggctggtctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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