KEGG   Mariprofundus aestuarium: Ga0123461_0151
Entry
Ga0123461_0151    CDS       T05212                                 
Name
(GenBank) RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG
  KO
K02405  RNA polymerase sigma factor FliA
Organism
maes  Mariprofundus aestuarium
Pathway
maes02020  Two-component system
maes02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:maes00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    Ga0123461_0151
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    Ga0123461_0151
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:maes03021]
    Ga0123461_0151
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:maes02035]
    Ga0123461_0151
Transcription machinery [BR:maes03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     Ga0123461_0151
Bacterial motility proteins [BR:maes02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    Ga0123461_0151
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 DUF6794 HrcA_DNA-bdg UPF0122
Other DBs
NCBI-ProteinID: ATX78604
UniProt: A0A2K8L112
Position
142569..143321
AA seq 250 aa
MTTPYDKQASPQFQSPDQLLETHLPLIRYHANQLIRRVPDSIEMDDLIDAGVLGLLDGAG
RFDPTKNAQFKTFISYRIRGSMIDYLRAFDWMPRSLRDSSKELQQAMSVLEQQYDRPVEE
EDVAVHLGISLDEYRNRLMHVRSLSIIYFDDLPQFGNDDDVSSVIDSISGDSDQMPDSQL
ELSDFTQMLARAITSLPTREKVLISLYYYEELNMKEIALVMDITESRVSQLHSQMVLRLR
TRLGLDFPNG
NT seq 753 nt   +upstreamnt  +downstreamnt
atgaccacaccgtacgataaacaggcatccccgcagttccagagtcccgatcaattgctc
gagacgcacctgccgctgattcgctaccatgccaaccagctgatccggcgtgttcccgac
tccattgaaatggatgacctgattgatgctggcgtactcggccttctcgatggtgccggt
cgtttcgatccgacaaagaatgcccagttcaaaacctttatctcctatcgtatacgaggc
tccatgatcgactacctgcgggcttttgactggatgccgagaagcctgcgtgactcttcg
aaagagctccagcaggcgatgtctgttctggagcagcagtatgaccgtcctgtcgaggag
gaggatgttgctgttcacctcggcatcagcttggatgaataccggaaccgcttgatgcat
gtgcgtagtctttccatcatctatttcgatgacctgcctcaatttggcaatgatgatgat
gtatcaagtgttattgattccatttccggggattcggaccaaatgcccgactctcagttg
gagttgtctgattttactcaaatgctagccagagccattacgagcctgccgacacgcgaa
aaggtgcttatttccctctattactatgaagagctgaatatgaaagagatcgcgctggtt
atggatataacggaatcacgggtgtctcagctgcacagccagatggtattgcgactcagg
accaggcttgggctggacttccccaatgggtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (22)   

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