KEGG T01575: MAF

Mycobacterium tuberculosis variant africanum: MAF_16450

Entry

MAF_16450         CDS       T01575

Symbol

uvrB

Name

(GenBank) putative excinuclease ABC (subunit B-helicase) UVRB

K03702

excinuclease ABC subunit B

Organism

maf Mycobacterium tuberculosis variant africanum

Pathway

maf03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:maf00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MAF_16450 (uvrB)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:maf03400]
    MAF_16450 (uvrB)
DNA repair and recombination proteins [BR:maf03400]
Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MAF_16450 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      MAF_16450 (uvrB)

SSDB

Motif

Pfam:

UvrB_inter UvrB Helicase_C ResIII DEAD UVR AAA_22 AAA_16 AAA_5 DUF87 Helicase_RecD AAA_30 AAA_19 AAA_7 AIG1

Other DBs

NCBI-ProteinID:

CCC26717

Position

1833614..1835710

AA seq 698 aa
MRAGGHFEVVSPHAPAGDQPAAIDELERRINSGERDVVLLGATGTGKSATTAWLIERLQR
PTLVMAPNKTLAAQLANELREMLPHNAVEYFVSYYDYYQPEAYIAQTDTYIEKDSSINDD
VERLRHSATSALLSRRDVVVVASVSCIYGLGTPQSYLDRSVELKVGEEVPRDGLLRLLVD
VQYTRNDMSFTRGSFRVRGDTVEIIPSYEELAVRIEFFGDEIEALYYLHPLTGEVIRQVD
SLRIFPATHYVAGPERMAHAVSAIEEELAERLAELESQGKLLEAQRLRMRTNYDIEMMRQ
VGFCSGIENYSRHIDGRGPGTPPATLLDYFPEDFLLVIDESHVTVPQIGGMYEGDISRKR
NLVEYGFRLPSACDNRPLTWEEFADRIGQTVYLSATPGPYELSQTGGEFVEQVIRPTGLV
DPKVVVKPTKGQIDDLIGEIRTRADADQRVLVTTLTKKMVEDLTDYLLEMGIRVRYLHSE
VDTLRRVELLRQLRLGDYDVLVGINLLREGLDLPEVSLVAILDADKEGFLRSSRSLIQTI
GRAARNVSGEVHMYADKITDSMREAIDETERRRAKQIAYNEANGIDPQPLRKKIADILDQ
VYREADDTAVVEVGGSGRNASRGRRAQGEPGRAVSAGVFEGRDTSAMPRAELADLIKDLT
AQMMAAARDLQFELAARFRDEIADLKRELRGMDAAGLK

NT seq 2097 nt +upstreamnt +downstreamnt
gtgcgcgccggcggtcacttcgaggtggtcagtccgcatgctccggccggcgaccagccg
gccgcaatcgacgagctggagcggcggatcaactcgggggagcgtgacgtggtgttgctc
ggcgccaccggcaccgggaagtcggcgaccaccgcgtggctgatcgaacgcctgcagcgg
cccaccctggtgatggcgcccaacaagacgttggccgcccagctggcgaacgaactgcga
gagatgttgccgcacaacgccgtcgagtacttcgtctcgtactacgactactaccagccg
gaggcgtatatcgcgcagaccgacacttatatcgaaaaggatagctccatcaacgacgac
gtggagcggctgcggcactccgcgacctcggcgctgctgtcgcgtcgtgacgtggtggtg
gtggcttcggtgtcctgcatctacggcctgggcacaccgcagtcctacctggaccgctcc
gtcgagctgaaggtgggcgaggaagtgccgcgcgatgggctgctgcggctgctggtcgac
gtgcaatacacccgaaacgacatgtcctttactcgcggctcgtttcgggtgcgcggcgac
accgtcgagatcatcccctcctacgaagagctggcggttcgcatcgagttcttcggcgac
gagatcgaggcgctgtactatctgcacccgctgaccggcgaggttatccgccaggtcgac
tcgctgcggatctttcccgctacccattacgtcgccggtccggagcggatggcgcatgcc
gtctcggccatcgaggaagaactcgccgagcgactcgccgagcttgagagccagggcaag
ctgctggaggcgcagcggctgcggatgcgcaccaactacgacatcgaaatgatgcggcag
gtcgggttctgctcgggcatcgagaactactcccgccacatcgacggtagggggcccggc
acgccgcccgcgaccctgctcgactatttccccgaggatttcctgctcgttatcgacgag
tcacatgtcaccgtgccgcagatcggcggcatgtacgagggcgacatctcccgcaagcgc
aacctggtggagtacggtttccggctgccgtcggcgtgcgacaaccgtccgctgacctgg
gaggagttcgctgaccggatcgggcagacggtgtatctgtctgccaccccggggccctac
gagctcagccagaccggcggcgagttcgtcgagcaggtgatccggccgaccggtctggtg
gacccgaaagtggtagtcaagccgaccaaagggcagatcgacgacctgatcggcgagatc
cgcacacgggcagacgccgaccagcgggtgctggtgacgacgctgaccaagaagatggtc
gaagacctcaccgactacctgctggagatgggcattcgggtgcgctacctgcattcggag
gtcgacacgttgcgccgggtcgagttgttgcgccagctgcgtctgggtgactacgacgtg
ctggtcggcatcaacctgctccgcgagggcctagacctgcccgaggtgtcgctggtggcg
atcctcgacgccgacaaagaaggattcctgcggtcaagccgcagcctgatccagaccatc
ggacgcgccgctcgcaacgtgtccggcgaggtgcacatgtacgccgacaaaatcaccgac
tcgatgagggaagccatcgacgagaccgaacgccggcgggccaagcagatcgcctacaac
gaggccaacggaatcgacccacagccgctgcgcaaaaagatcgccgacatcctcgatcag
gtctatcgggaggccgacgacaccgccgtcgtcgaggtcggcggatccgggcgcaacgca
tcccgcggccggcgggctcagggtgagcccggccgggcggtcagcgccggcgtgttcgag
ggccgcgacacctccgccatgccgcgcgctgagctggccgacctaatcaaagacctcacc
gcacagatgatggcggccgcgcgcgacctgcagttcgagctggcggcccggttccgcgac
gagatcgccgacctcaagcgggagctgcgggggatggacgcggccggcctgaagtga

All links

Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (15)   
   Pfam (15)   
All databases (22)   

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