KEGG   Magnetospira sp. QH-2: MGMAQ_2469
Entry
MGMAQ_2469        CDS       T03795                                 
Symbol
rne
Name
(GenBank) Ribonuclease E
  KO
K08300  ribonuclease E [EC:3.1.26.12]
Organism
magq  Magnetospira sp. QH-2
Pathway
magq03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:magq00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MGMAQ_2469 (rne)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:magq03019]
    MGMAQ_2469 (rne)
   03009 Ribosome biogenesis [BR:magq03009]
    MGMAQ_2469 (rne)
Enzymes [BR:magq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.12  ribonuclease E
     MGMAQ_2469 (rne)
Messenger RNA biogenesis [BR:magq03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     MGMAQ_2469 (rne)
Ribosome biogenesis [BR:magq03009]
 Prokaryotic type
  rRNA processing factors
   MGMAQ_2469 (rne)
SSDB
Motif
Pfam: RNase_E_G RNase_E_G_Thio S1
Other DBs
NCBI-ProteinID: CCQ74332
UniProt: W6KL11
Position
complement(2516568..2518982)
AA seq 804 aa
MATKRMLIDATHAEETRVVVAMGNRLEDFDVEVASRKQLKGNVYLAKVTRVEPSLQAAFV
EYGGNRHGFLAFSEIHPDYYQIPVADREALIAETPDDESANGEVDEPAETNGGEEGEGEG
ASLEVLGGDDVAEETEARRPYHSYRNYKIQEVIKRRQVLLVQVVKEERGNKGAALTTYLS
LAGRYCVLMPNTTRAGGISRKISSANDRKRLKSVLGDLSIPEGMAVIVRTAGAQRSKAEI
KRDYDYLLRVWDTIRTQTLESAAPCLIHEEGNLIKRSIRDLYDKDIDEVVVEGDDGYRTA
KDFMKMLIPSHAKKVQPYKDIVVPLFHRYQVESQLDAMHGPDVQLKSGGYIVINPTEALV
SIDVNSGRSTKERNIEETAYRTNLEAADEIARQLRLRDLAGLIVIDFIDMEVSRYQTNVE
RRLKEAMRIDRARIQIGRISPFGLMELSRQRLRPSLIETSFESCPHCAGTGVIRSTESTA
LHVLRAIEEEGLRGRAAEIAVHVATSVALYILNYKRDALADIESRYGFSVMLMGDDSLIP
PDHRIERLRARSADDPVIEALPVVVEPVDDEEGTGEDGSKRRKRRRRRRGKRPEEGETMD
AESRDAKSEEGESEGTEGTEGTEGATASTTNEDGDEEAPKKRRRRGRRGGRRRRRPEGEE
NGSENGEEASAASAAPAETGEQAPSTESEGSEQPEQEAYTEQAAPVSEAETTETTEAAEP
EEKPKKPARRRAPRKKKEAVAAEAPVEAAPEPVVEAQPEPKPKPEPEPEPEPEEAPALAG
TEVIDVDAVQSESRRKGWWSRLLD
NT seq 2415 nt   +upstreamnt  +downstreamnt
atggcaaccaagcgtatgttgatcgatgccacccacgccgaagagactcgggtcgtggtg
gccatggggaaccgactagaagactttgacgtcgaggtcgcatcccgcaaacagctcaag
ggtaacgtctatctcgctaaagtaacccgcgtcgaaccgtccttgcaggcggccttcgtc
gaatatggcggcaatcgtcatggctttctggcctttagtgaaatccaccctgactattac
caaatcccggtcgccgatcgggaagcactgatcgccgaaacccccgacgacgagtccgct
aacggcgaggtcgatgaacccgccgaaaccaacggcggcgaagagggcgagggcgaaggc
gccagcctggaggttttgggcggcgatgatgtggccgaggaaaccgaggcccgacgccca
taccactcctatcgcaactacaaaattcaagaagtcatcaagcggcgccaggtgctgctg
gttcaagtggtcaaggaagaacggggcaacaagggcgccgcgctgaccacctatctgtcc
ttggccggtcgctattgcgtgttgatgcccaacaccacccgggcgggcggcatctcccgc
aagatttccagcgccaatgaccgcaagcggctgaaatcggtgctcggcgacctatcgatc
cccgaaggcatggccgtcatcgtgcgcacggcgggggcgcaacgctccaaggccgagatt
aagcgcgactacgactacttgctgcgggtttgggacaccattcgtactcagacgctggag
agtgcggcaccgtgcctgatccacgaggaaggcaacctgatcaagcgctccatccgcgat
ctatacgacaaggacattgatgaagtggtggtcgagggcgacgatggctatcgcaccgcc
aaggacttcatgaaaatgttgatcccgtcgcatgcgaaaaaggtccaaccttacaaagac
atcgtggtgccgttgttccaccgttatcaggtggaaagtcagttggatgccatgcacggg
cctgacgtacagctcaaatcggggggctatatcgtcatcaatcccaccgaggccttggtg
tccatcgacgtcaactcgggacgctccaccaaagaacgcaacattgaagagaccgcctat
cggaccaatctggaagcagcggacgagatcgcccggcagcttcggttgcgcgatttggct
ggtctgatcgttatcgacttcatcgatatggaggtgtcgcgctatcagaccaatgtggaa
cggcggctcaaggaagcgatgcggattgaccgggcccggatccagattggtcgtatcagt
ccttttggtctgatggagttgtcacgacaacggctgcgtccgagtttgatcgagaccagc
ttcgaatcctgcccccattgcgccgggacgggagtgatccgctcgacagaatccaccgcc
ctgcatgtattgcgggccatagaggaagaaggcctgcgtggccgcgcggccgagattgcc
gtgcatgtggcaacctccgtggcgctgtatatcctcaactataagcgcgatgccctggcc
gatatcgaaagtcgttatggcttctcggttatgttgatgggggatgactcgctgattccg
ccagaccatcgtatcgagcgtctgcgggcgcggagcgccgacgatccggtgatcgaggcg
ctgcccgtggtggtcgagcccgtggatgacgaggaaggcactggcgaggacggcagcaaa
cgtcgcaagcgccgccgtcgccgtcgtggcaagcgccccgaagagggcgagaccatggac
gccgagtcacgcgacgccaagagtgaagaaggcgaatccgaaggcaccgaaggcactgaa
ggcaccgagggcgccacggcatctaccaccaacgaagatggtgacgaagaagcccccaag
aaacgtcgtcgccggggtcgccggggaggccgtcgtcggcgccgtcccgagggcgaggaa
aatggttcggaaaacggtgaagaggcgagtgccgccagcgccgcgcccgctgaaaccggc
gaacaggctccgtccacggaatccgaaggcagcgagcagccagaacaagaggcctacacg
gagcaagcggctcctgtatcggaagccgaaaccaccgagaccactgaagctgccgagcca
gaggagaagcccaagaaacccgctcgtcgacgcgcgccgcgtaagaagaaggaagccgtc
gccgccgaggcaccggtggaagccgccccggagccagtcgtcgaggcacaaccggagccc
aagcccaagcccgagcccgagcccgagccggaaccggaagaggcgccggcactggcgggg
accgaagtcatcgatgtggatgcggttcagtcggagtcccgccgaaaaggctggtggtcg
cgtctgctcgattag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (316)   
   KEGG ORTHOLOGY (1)   
   RefGene (313)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (327)   

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