KEGG T04231: XM1

Magnetospirillum sp. XM-1: XM1_1256

Entry

XM1_1256          CDS       T04231

Name

(GenBank) putative RNA (uracil-5)-methyltransferase

K03215

23S rRNA (uracil1939-C5)-methyltransferase [EC:2.1.1.190]

Organism

magx Magnetospirillum sp. XM-1

Brite

KEGG Orthology (KO) [BR:magx00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:magx03009]
    XM1_1256
Enzymes [BR:magx01000]
2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.190  23S rRNA (uracil1939-C5)-methyltransferase
     XM1_1256
Ribosome biogenesis [BR:magx03009]
Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    XM1_1256

SSDB

Motif

Pfam:

tRNA_U5-meth_tr TRAM Cons_hypoth95 MTS

Other DBs

NCBI-ProteinID:

CUW38325

UniProt:

A0A0U5MF79

Position

I:complement(1229737..1231053)

AA seq 438 aa
MRKPRRAPPRSGRTSPAPRTVELSIEQVGARGDGIARLDAETVFVPFTVAGDKVLARVEG
KRGDGLTAALIEVTEPGPGRVAPPCAHYGRCGGCSLQHLDDALYAEWKRELLITQLARQG
LADAPVQPLMRIPPASRRRADFTFTRAKGGILLGFNGRASHTVIDIERCPLLDPALGDAL
PGLRRMLAGIAVEGGGEMIVTLTEGGLDVLVEAPARLDLFEREALAAAAESLDLARLHWR
RPGSGFVEPIARRRPALVRFGGIAVEPAPGAFLQPTRGGELAIAEAILAAIPGGVPVADL
YAGCGSFSLPLAQRGPVRAVEGEQGPVAALDAAARAAKLPLTTEVRDLARRPLAAHELKA
FRAVVLDPPRAGAAAQAAELARPSAGGPSTIAMVSCNPATLARDLRTLCDGGWRIEGISP
IDQFPWSAHLEAVATLRL

NT seq 1317 nt +upstreamnt +downstreamnt
atgagaaagccccgccgcgccccgccgcgttccggccggacgtcccccgccccgcgcacc
gtcgaactgagcatcgaacaggtgggagcgcgcggcgacggcatcgcccgcctggacgcg
gagacggtgttcgttcccttcacggtggccggcgacaaggtgctggcccgggtcgagggc
aagcggggcgacggcctgaccgccgccctgatcgaggtcaccgagcccggccccggccgc
gtcgccccaccctgcgcccattacggccgctgcggcggctgctcgctccagcatctggac
gacgccctttacgccgagtggaagcgcgagttgctgatcacccaactggcccgccagggt
cttgccgatgccccggtgcagccgctgatgcgcattccgcccgcctcgcggcggcgcgcc
gacttcaccttcacccgcgccaagggcggcatcctgctgggcttcaacggcagggccagc
cataccgtcatcgacatcgagcgctgcccgctgctcgaccccgccttaggggacgccctg
cccggcctgcgccgcatgctggccggcatcgccgtggagggcggcggcgagatgatcgtc
accctgaccgaaggcggcctggacgtgctggtggaagcgcccgcccgcctcgacctgttc
gagcgcgaggccctggcggcggcggcggaatccctggacctcgcccgcctgcactggcgc
aggccgggcagcggcttcgtcgagcccatcgcccggcgtcgcccggccctggtgcggttc
ggcggcatcgcggtcgaacccgcccccggcgccttcctgcagccgacccgcggcggcgag
ctggccatcgccgaagccatcctggccgccatcccggggggcgtgccggtggccgacctt
tatgccggctgcggcagcttcagcctgccgctggcccagcgcggaccggttcgcgccgtg
gaaggcgagcaggggccggtggcggcgctggacgccgccgcccgggccgcgaaactgccg
ctcaccaccgaggtgcgcgacctggcgcgccgccccctggcggcccatgagctgaaagcc
ttccgcgccgtggtgctggacccgccgcgggccggcgcagccgcccaggccgccgagttg
gcccgcccctcggccggaggaccttcgaccatcgccatggtgtcctgcaatcccgccacc
ctggcccgcgatctgcgcaccctttgcgatggcggctggcgcatcgaaggaatctctccc
atcgaccagttcccctggtccgctcatctggaagcggtggcgacccttcggttatga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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