KEGG   Magnetospirillum sp. XM-1: XM1_2371
Entry
XM1_2371          CDS       T04231                                 
Symbol
hupB
Name
(GenBank) HU, DNA-binding transcriptional regulator, beta subunit
  KO
K03530  DNA-binding protein HU-beta
Organism
magx  Magnetospirillum sp. XM-1
Brite
KEGG Orthology (KO) [BR:magx00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:magx03032]
    XM1_2371 (hupB)
   03036 Chromosome and associated proteins [BR:magx03036]
    XM1_2371 (hupB)
   03400 DNA repair and recombination proteins [BR:magx03400]
    XM1_2371 (hupB)
DNA replication proteins [BR:magx03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    XM1_2371 (hupB)
Chromosome and associated proteins [BR:magx03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    XM1_2371 (hupB)
DNA repair and recombination proteins [BR:magx03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      XM1_2371 (hupB)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG DUF2267 HU-CCDC81_euk_1 HU-DNA_bdg HU-CCDC81_euk_2
Other DBs
NCBI-ProteinID: CUW39440
UniProt: A0A0U5MHM3
Position
I:2356195..2356473
AA seq 92 aa
MNKSELIAAVADGANMTKADAASAIDAVFEAVTAAMKSGDDVRLVGFGSFSVSARPAREG
RNPQTGKTLTIAASKSAKFTAGKSLKDTINGR
NT seq 279 nt   +upstreamnt  +downstreamnt
atgaacaagtccgaattgatcgccgccgttgccgatggtgccaacatgaccaaggccgac
gcggcaagtgccatcgacgctgtattcgaagccgtcaccgccgccatgaaatcgggcgat
gacgtgcgtcttgttggcttcgggtctttctcggtttctgcccgtcctgcacgtgaaggc
aggaatccgcagactggcaagaccctcaccatcgcggccagcaagtctgccaaattcacc
gccggaaagagcctcaaggacaccatcaatggccgatga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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