KEGG   Magnetospirillum sp. XM-1: XM1_3299
Entry
XM1_3299          CDS       T04231                                 
Symbol
xthA
Name
(GenBank) Exonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
magx  Magnetospirillum sp. XM-1
Pathway
magx03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:magx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    XM1_3299 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:magx03400]
    XM1_3299 (xthA)
Enzymes [BR:magx01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     XM1_3299 (xthA)
DNA repair and recombination proteins [BR:magx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     XM1_3299 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: CUW40360
UniProt: A0A0U5MM11
Position
I:3279221..3279997
AA seq 258 aa
MGLRIATWNVNSVRARLGNVLEWLNAFAPDVVLLQEIKCQDHDFPRLEIEAAGYRAAVHG
QKSYNGVAILSRLPMSDVVCRLPGDEADEQARYIEATIAGWRLASLYLPNGNPAPGDKFD
YKLAWMARLKRHAETLLAAGTPFALGGDFNICPNDDDVYDPPNWRGDALCRPDSRAAFRS
IVNLGLTEAFRALHPDEKGRYSFWDYQAGAWQRDEGLRIDHFLLSPQAADRLRACDIDKG
PRAREKASDHTPVWIELD
NT seq 777 nt   +upstreamnt  +downstreamnt
atgggcctgcgcatcgccacctggaacgtcaattcagtgcgggcccgcctgggcaacgtg
ctcgaatggctgaacgccttcgcccccgacgtggtgctgctgcaagagatcaagtgccag
gaccacgactttccccgcctggagatcgaagccgccggctatcgcgccgccgttcacggc
cagaagagctataacggcgtcgccatcctgtcgcggctgcccatgagcgacgtcgtctgc
cgcctgcccggcgacgaggccgacgaacaggcccgctacatcgaggcgaccatcgccggc
tggcgtctggcctccctttatctccccaacggcaatcccgctccgggtgacaagttcgac
tacaagctggcgtggatggcgcggttgaagcgccatgcagaaaccctgctggcggcggga
acgcccttcgccctgggcggcgacttcaacatctgccccaatgacgacgacgtctacgac
ccgcccaactggcggggtgacgcgctgtgccgccccgacagccgcgccgccttccgctcc
atcgtcaaccttgggctgacagaggcgttccgcgccctgcatcccgatgagaagggccgc
tattccttctgggattatcaggccggcgcctggcagcgggacgaaggcttgcgcatcgac
catttcctgctgtcgccccaggccgccgaccgcctgcgggcctgtgacatcgacaaggga
ccgagggccagggaaaaggcctcggaccacacgccggtgtggatcgagctggattag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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