KEGG   Methylotuvimicrobium alcaliphilum: MEALZ_1006
Entry
MEALZ_1006        CDS       T01649                                 
Name
(GenBank) Ribonuclease D
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
mah  Methylotuvimicrobium alcaliphilum
Brite
KEGG Orthology (KO) [BR:mah00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mah03016]
    MEALZ_1006
Enzymes [BR:mah01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     MEALZ_1006
Transfer RNA biogenesis [BR:mah03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    MEALZ_1006
SSDB
Motif
Pfam: DNA_pol_A_exo1 HRDC
Other DBs
NCBI-ProteinID: CCE22700
UniProt: G4T401
Position
1144988..1146148
AA seq 386 aa
MTAIQYIDTPQKLDELCRQIAKESWLALDTEFLREKTYYPKFCLLQIATPEWVACVDPIA
LDDLGALFEVIYNPKIIKVFHSCRQDLEIFYQLTGKIPQPIFDTQIAAPLLGYQENPGYA
MLVSSFLNINLSKAHTRTDWTVRPLSQAQLQYAADDVIYLCQIYQTMLKKLAELNRLDWL
ESDFAMLNDPELYEISPKNAWLKIRGKNKLTGKQLSIVQTLAEWREQTAQKEDRPRNWLL
RDDMMFELAKQQPGTVEEMLKVHNINERMVSKHGKILCQLINEAKQRPPIPLHENGRSPK
KTQQQEAILDILTALVRIRADENSLNPAILADRKALELLLFEDPESLLLKGWRYAMAGRE
LLGLLKGEQVLGIDGEKVYTIDNPSS
NT seq 1161 nt   +upstreamnt  +downstreamnt
atgaccgccattcaatatatcgatactccgcaaaagcttgacgaattgtgccgacaaatc
gccaaggaatcttggctagcgctcgataccgagtttctcagggaaaaaacttattatccc
aaattttgtttgctgcaaatcgcgacgcccgagtgggtggcgtgtgtcgatccgattgcg
ttggacgatttgggcgcgctgtttgaggttatctataatccgaaaataatcaaagtgttc
cattcttgccggcaggatctggaaattttttatcaattgaccggcaaaattccgcagccg
attttcgatacgcaaattgccgcgcccttgttgggatatcaggaaaatcccggctatgcg
atgttggtatcgagttttttgaatatcaatctcagcaaagcccatacccgcaccgactgg
accgttaggccgcttagtcaggcgcaattacagtatgcagccgacgacgtgatttattta
tgtcaaatttatcaaaccatgctcaagaaactggccgagctcaatcgtttggattggctg
gaaagcgatttcgcgatgttgaacgatcccgagctttacgaaatttcaccgaaaaatgct
tggcttaaaattcgcggcaaaaataaattgaccggtaagcaattatcgatcgtacaaacc
ttggccgagtggcgcgaacaaaccgcgcaaaaagaggatagacctcgaaattggttgctt
cgcgacgatatgatgtttgagttggcaaagcagcagcccggtactgtcgaagaaatgttg
aaagttcataatatcaacgagcgtatggtcagcaagcacggtaagatcttatgccaattg
attaatgaagccaagcaaaggccgccgataccactgcatgaaaatggccggtctcccaaa
aagacccagcagcaagaagctattttggatattttgacggcattggtacgcattagagcg
gacgagaactcactgaatccggctatattggctgatcgtaaggcattagaattgttattg
tttgaagaccccgaatcattattgttgaaaggttggcgctatgcaatggccggccgtgag
ttgctgggattattgaaaggcgaacaagtgctcggtattgacggagaaaaagtctatacc
atcgataatccttcaagttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (58)   
   KEGG ORTHOLOGY (1)   
   RefGene (55)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (66)   

Download RDF
DBGET integrated database retrieval system