KEGG   Monopterus albus (swamp eel): 109958257
Entry
109958257         CDS       T05607                                 
Symbol
usp13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
  KO
K11836  ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.4.19.12]
Organism
malb  Monopterus albus (swamp eel)
Brite
KEGG Orthology (KO) [BR:malb00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:malb01002]
    109958257 (usp13)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:malb04121]
    109958257 (usp13)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:malb04147]
    109958257 (usp13)
Enzymes [BR:malb01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.19  Omega peptidases
    3.4.19.12  ubiquitinyl hydrolase 1
     109958257 (usp13)
Peptidases and inhibitors [BR:malb01002]
 Cysteine peptidases
  Family C19: ubiquitin-specific protease family
   109958257 (usp13)
Ubiquitin system [BR:malb04121]
 Deubiquitinating enzyme (DUB)
  Ubiquitin-specific proteases (UBPs)
   UBP/USP
    109958257 (usp13)
Exosome [BR:malb04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   109958257 (usp13)
SSDB
Motif
Pfam: UCH UBA zf-UBP_var zf-UBP UCH_1 UBA_4
Other DBs
NCBI-GeneID: 109958257
NCBI-ProteinID: XP_020452430
Position
Unknown
AA seq 862 aa
MAADLGELLVPYMPTIRVPRSGDRVFKSECAFSFDSPESEGGLYVCMNTFLGFGREHVER
HYRKTGQSVYMHLKRHVKEKATGAAGGAIPRRRNGKVFLDLELNRDFNGEDYEYEDEAKL
VIFPDHFEIPLPNIEELPALVTIACDAVLNAPSAYKKQEPESWEEEIQVSKHARSLRQLD
NGVRIPPSGWKCQKCEMRENLWLNLTDGAVLCGKWFFDGSGGNGHALEHYRETSYPLAVK
LDNITPDGADVYSFEEEEAVLDPHISEHLAHFGIDMLQMQKRTENGHHTDNNAQPRVSEW
EVIQESGMKLKAVYGSGYTGIKNLGNSCYLSAVMQVLFSIPDFQRMYVGNLQRIFDYSPL
DPTQDFATQMAKLGHGLLSGQYSKPPMKSELIEQVMKEEYKVLNWHQQKGVSPRMLKALV
SRGHPEFSSNRQQDAHELLLHILNLVERNSTGSENPSDVFRFLVEERVQCCQSRRVRYTQ
RVDYCIQLPVPKAATNREELLAYEVKRKEAEENMRAPPEPVKARIPFTACLQAFTEPENV
PDFWSSALQAKSAGIKTSRFASFPEYLIVQIKKFTFGVDWVPKKLDLAIDVPDFLDLNRL
RATGLQAGEEELPDLMPPIVLPEDTRDNSMSSLDSPEIDEAAVMQLAEMGFPLEACRKAV
YYTGNMGPEMAFNWIIAHMEEPDFAEPLTLPSMMDPGPSASDSPMGATPMGNSPPEESVA
ILTSMGFPRSHSIKALKSTNNNLERALDWIFTHPEEEESDALSDMADTEPNDNAFSNATS
HSDSMMSPDRDTSGPRVKDGPGRYELLAFISHMGASTMSGHYVCHIKKEGRWVIYNDHKV
CLSERPPKDLGYIYFYHRLSSS
NT seq 2589 nt   +upstreamnt  +downstreamnt
atggctgcagacctaggcgagctgctggtcccgtacatgcccaccatcagagtgcccaga
agcggagacagggttttcaagagcgagtgtgccttttctttcgactctcccgagtctgag
ggaggactgtatgtgtgtatgaacacattcctgggctttggacgagaacatgtagagaga
cattatcgcaaaacaggacagagtgtttacatgcacctcaaacgacatgtcaaagagaaa
gccacaggagctgcaggaggcgccatccccagacgaagaaatggaaaagtgtttctagat
ttagagctaaatcgtgactttaatggagaggactatgaatatgaagacgaggccaagctt
gtcatttttccggaccacttcgagatccccttaccaaatattgaggagttgcccgctctg
gtgaccattgcctgtgacgcagtgctcaatgcaccatctgcttacaagaagcaggagcct
gaatcctgggaggaggagatacaagtttccaaacatgccaggagcctcagacagctggat
aatggggtccgaatcccaccaagtggctggaagtgtcagaagtgtgagatgagagaaaac
ctgtggctgaacctgacggatggagcggtgctctgtgggaagtggttctttgatgggagc
ggcggcaatggccacgcgctggagcactacagagagaccagctaccccctggctgtcaaa
ctggacaacatcaccccagatggagcagatgtctattcatttgaagaggaagaagctgtg
ttggacccccacatatcagaacacttggcacactttggaatagacatgctacagatgcag
aaaagaacagagaacgggcaccacacagacaataatgcccagccgcgggtcagtgaatgg
gaggtgatccaggaatccggaatgaagctgaaggcagtatatggctctggttacacaggc
atcaaaaacctgggcaacagctgctacctcagcgcagtaatgcaggtcctcttcagcatc
ccagacttccagaggatgtatgtgggtaatcttcagaggatatttgactattcgcccctt
gaccccacccaggacttcgccacacaaatggctaaactgggacatggactgctctcaggc
cagtactccaaaccacccatgaaatctgagctcattgaacaggtgatgaaagaagaatac
aaggtattaaactggcaccagcagaagggtgtctctccccggatgctgaaggccctggtc
agcagaggacatccagagttttcttcaaacagacaacaagatgcccacgagctcctcctg
cacatcctcaacctggtggagaggaatagcacaggctcagagaatccgagtgacgtcttc
cggttcctggtggaagagcgagttcagtgctgccagagtcgtcgggtgcgttacactcag
cgggtggactactgcatccagctgccagtgcccaaggccgccaccaatcgagaggagttg
ctggcatatgaggtcaagcggaaggaagcggaggagaacatgcgggctcctcctgaacca
gtgaaagcacggatccccttcaccgcctgcctgcaagccttcacagaaccggagaacgtc
ccagacttctggagctcagcactgcaagccaagtcagccggaatcaaaacttcccgtttt
gcctccttcccagagtatctgatagtacagataaagaaattcacattcggggttgactgg
gtgccaaagaaactagacctggccatagatgttccggatttcctggacctgaaccgactg
cgggccacagggctgcaggcgggtgaagaggagctgcctgatcttatgcctcccattgtg
ctgcctgaagacaccagagataactctatgagctctttagactccccagaaatagacgag
gccgcggtgatgcagctggcagagatgggctttccactggaggcttgtaggaaggctgtc
tactacacaggcaacatgggccccgagatggccttcaactggatcatagcccacatggag
gagcctgactttgcagaacctctcactctgccctccatgatggatcctggtccctccgct
agtgacagccccatgggtgccaccccgatgggcaactcacctcctgaggagagcgttgcc
atcctcacttcaatgggcttccctcgttctcacagcattaaggcactgaaatccacgaac
aacaaccttgaacgagcgctcgactggatcttcacccacccagaggaggaggagagtgat
gccctgtcagacatggctgacacagagcccaacgacaacgctttctccaatgccacctca
cacagtgactccatgatgtcgccagacagagacacgtcaggcccgcgagtcaaagatgga
ccgggacgttatgagctccttgcctttatcagccacatgggagcttccacaatgtctgga
cattatgtttgtcacatcaaaaaggagggaaggtgggtgatctacaatgaccacaaagtg
tgtttgtcagaaaggcctccaaaagacttgggctacatctacttttaccatcgactgtct
agcagttaa

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Ontology (5)   
   KEGG BRITE (5)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (4)   
   RefSeq(pep) (4)   
DNA sequence (4)   
   RefSeq(nuc) (4)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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