KEGG   Monopterus albus (swamp eel): 109962521
Entry
109962521         CDS       T05607                                 
Symbol
cnot1
Name
(RefSeq) CCR4-NOT transcription complex subunit 1 isoform X1
  KO
K12604  CCR4-NOT transcription complex subunit 1
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:malb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    109962521 (cnot1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:malb03019]
    109962521 (cnot1)
Messenger RNA biogenesis [BR:malb03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     109962521 (cnot1)
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     109962521 (cnot1)
SSDB
Motif
Pfam: Not1 CNOT1_CAF1_bind CNOT1_TTP_bind DUF3819 CNOT1_HEAT
Other DBs
NCBI-GeneID: 109962521
NCBI-ProteinID: XP_020459962
Position
Unknown
AA seq 2396 aa
MNLDSLSLALSQISYLVDNLTKKNYRASQQEIQHIVNHHGPEADRHLLRCLFSHVDFSGD
GKSSGKDFHQTQFLIQECVSLISKPNFISTLCYAIDNPLHCQKSLKPSSHLFAQLSKVLK
LSKVQEVIFGLALLNSSNTDLRGFAAQFIKQKLPDLLRSYVDADLGGNQEGGFQDIAIEV
LHLLLSHLLFGQKGASGVGQEQIDAFLKTLCRDFPQERCPVVLAPLLYPGKRDILMDRIL
PDSGELAKTMMESSLADFMQEVGYGFCASVDECRNIIIQYGVREVTASQVARVLGMMART
HSGLTDGIPLQSISAPGSGIWSDGKDKNDGSQAHAWNVEVLIDVVKEVNPNLNFKEVTYE
LDHQGFMIRDSKGLQIVVYGIQRGLGMEVFPVDLIYRPWKHAEGQLSFIQHSLMSPEVFC
FADYPCHTVAIDILKAPPEDDNREIATWKSLDLVESLLRLSEVGQYEQVKQLFSFPIKHC
PDMLVLALLQISTSWHALRHELISTLMPIFLGNHPNSAIILHYAWHGQGQSPSIRQLIMH
SMAEWYMRGEQYDQAKLSRILDVAQDLKSLSMLLNGTPFAFVIDLAALASRREYLKLDKW
LTDKIREHGEPFIQACVTFLKRRCPSIMGGLAPDKDQPKSAQLPPETLATMLACLQSCAG
SVSQELSETILTMVANCSNVMNKARQPPPGVMPKGRAPSTSSLDAISPVQMDPLSAMGSL
NLGSTATSHTQSMQGFPTSLSSAFSNPQSPAKAFPPLSNPNPSTPFGGIGSLSSQLPGMD
SGPLGSGIGSGIGSSLGMPTVSTDPFGTRKMSTPGLNAPPTFQQTDLSQVWPEANQHFSK
EIDDEANSYFQRIYNHPPHPTMSVDEVLEMLQRFKDSNIKREREVFNCMLRNLFEEYRFF
PQYPDKELHITACLFGGIIEKGLVTYMALGLALRYVLEALRKPFGSKMYYFGIAALDRFK
NRLKDYPQYCQHLASIGHFLQFPHHLQECVQYIEYGQQSRDPPVKMQGSITTPGSLALAQ
VQAQAQSQQPGGPKAPQPGQPSTLVTTTTTTTTAAKTTTITRPTPSSFKKDVPPSINTTN
IDTLLVATDQTERIVEPPDNVQEKIAFIFNNLSQSNMTQKVEELKETVKEEFMPWVSQYL
VMKRVSIEPNFHSLYSNFLDTLKNPEFVKMVLSETYRNIKVLLTSDKAAANFSDRSLLKN
LGHWLGMITLAKNKPILYTDLEVKSLLLEAYVKGQQELLYVVPFVAKVLESSLRSMVFRP
QNPWTMAIMNVLAELHQEHDLKLNLKFEIEVLCKNLSLDINELKPGNLLKDKEKLKNLEE
QLSAPKKETKPPEEMLPASTTGDFVPFAAPPSTPAPTTTTTTTTTCTTTGPPTPQFSYHD
INVYALAGLAPHININISIPLLQAHPQLKQCVRQSVERAVQELVHPVVDRSIKIAMTTCE
QIIRKDFALDSEESRMRVAAHHMMRNLTAGMAMITCREPLLMSIATNLKNSFAAALRAPT
TQQRELMEEAAARIAQDNCELACCFIQKTAVEKAGPEMDKRLATEFELRKHARQEGRRYC
DPVVLTYQAERMPEQIRLKVGGVDPKQLAVYEEFARNVPGFLPSNDLSQPTGFLAQPMKQ
QAWATDDVAQIYDKCMTDLEQHLHAIPPALAMNPLTQAVRCLLEAVAVARNSRDGIAALG
LLQKAVEGLLDATSGADADLLLRYRECHLLVLKALQDGRAYGPQWCNKQITRCLIECRDE
YKYNVEAVELLIRNHLVNMQQYDLHLAQSMENGLHYMAVAFAMQLVKLLLVDERSVSHVT
EADLFHTIETLMRTCAHSRANAPEGLPQLMDVVRSNYEAMIDRAHGGPNFMMHSGISQAS
EYDDPPGLREKAEYLLREWVNLYHSAAAGRDSTKAFSAFVGQMHQQGILKTDDLITRFFR
LCTEMCVEISYRAQAEQQHNPAASAAIIRAKCYHNLDAFVRLIALLVKHSGEATNTVTKI
NLLNKVLGIVVGVLIQDHDVRQTEFQQLPYHRIFIMLLLELNAPEHVLETINFQTLTAFC
NTFHILRPTKAPGFVYAWLELISHRIFIARMLAHTPQQKGWPMYAQLLIDLFKYLAPFLR
NVELNKPMQILYKGTLRVLLVLLHDFPEFLCDYHYGFCDVIPPNCIQLRNLILSAFPRNM
RLPDPFTPNLKVDMLSEINIAPRILTNFTGVMPSQFKKDLDSYLKTRSPVTFLSELRSNL
QVSNEPGNRYNIQLINALVLYVGTQAIAHIHNKGSTPSMSTITHSAHMDIFQNLAVDLDT
EGRYLFLNAIANQLRYPNSHTHYFSCTMLYLFAEANTEAIQEQITRVLLERLIVNRPHPW
GLLITFIELIKNPAFKFWSHDFVHCAPEIEKLFQSVAQCCMGQKQAQQVMEGTSAS
NT seq 7191 nt   +upstreamnt  +downstreamnt
atgaatcttgactcgctctcgctggctttgtctcaaatcagctatctggtggacaattta
acaaagaaaaactacagagccagccagcaagaaatacagcatattgtaaatcatcacgga
cccgaggctgacaggcatctactacgctgtctcttctcccatgtggatttcagtggtgat
ggtaaaagcagtggcaaggattttcaccagacgcaatttctgatccaggagtgtgtgtcg
ctgatatcaaagccaaattttatctctactctttgttacgccattgacaatcccctgcac
tgccagaagagtttgaagccgtcttcccacttattcgctcaactgagtaaagttcttaag
ctcagcaaggtccaagaggtgatatttggccttgctttgctcaactccagcaacacagac
cttcgtggttttgctgcgcagttcatcaagcagaaacttccagacctccttcggtcatac
gttgacgctgatcttggaggaaaccaggaaggtggcttccaagacattgccatagaggtc
ttgcacctactgctctcccatctactgtttggccagaagggagccagtggggtaggacaa
gagcaaattgacgccttcctcaagacactttgccgagatttcccccaggagcgctgccct
gtggtgcttgcaccactgctgtaccctggaaaacgggacattctgatggacaggatcctg
ccagactcgggggagttagcgaagaccatgatggagagttctcttgcagactttatgcaa
gaagttggatatggcttttgtgctagtgtggatgagtgcagaaacataatcatccagtat
ggggtgagagaggtgactgccagccaggtagccagggtcctgggcatgatggctcgtacc
cactctggtctgacagatggcatcccactacagtcaatctctgctccaggaagtggtatc
tggagtgatggtaaagataagaacgatggctcacaggcacacgcttggaatgttgaggtt
ctcatcgatgttgtcaaggaagtgaatcccaacttgaacttcaaagaggtgacatatgaa
ctggaccaccaaggttttatgatccgggacagtaaaggcctacagatcgtggtgtatggc
attcagagagggttgggcatggaggtctttcctgtcgatctcatctatcggccttggaaa
catgcagagggacagttgtcattcattcagcactctctgatgagccctgaagtgttttgc
tttgcagactacccttgccacactgtggccattgacatccttaaggctccaccagaggat
gacaaccgggagattgccacctggaaaagtctagacctggtggagagcctgcttaggctg
tctgaggtgggccagtatgagcaggtcaagcagctgtttagtttcccaatcaagcactgc
ccagacatgttggtgctggcattgctgcagatctccacctcctggcacgcactgcgccat
gaactcatctctaccctaatgcccatctttctggggaaccaccccaactctgccattatc
ctgcactatgcctggcatggacaaggtcagtctccctctattcgtcagctaattatgcat
tcaatggctgagtggtacatgagaggggagcagtatgaccaggccaagctgtctcgcatc
ctggatgtggcccaggacttgaagtcattgtcgatgctgctgaatggtactccatttgcc
tttgttattgaccttgctgcacttgcctctcgacgtgaatacctcaaacttgataaatgg
ctgactgacaaaatcagagagcatggggaaccttttatccaggcatgtgtcacatttctg
aagaggcgctgcccatccataatggggggtttggccccagacaaggaccagccaaaaagt
gcccagctgcccccagagaccttggctactatgctggcttgcctgcagtcctgtgctggg
agtgtatcccaggagctgtcagagactatcttgaccatggttgcaaactgtagcaatgta
atgaataaagcccggcagccaccaccaggagtgatgccgaagggacgtgcccctagtacc
agcagcctggatgccatttcacctgtacagatggaccctctctctgccatgggttccttg
aacctggggagcacagccacctcccacactcagagcatgcagggtttcccaacctcactg
agttcagcttttagtaatccccagtccccagcaaaggcattcccacctctctccaatcct
aaccccagcacaccatttgggggcattggcagtctgtcctcacagctcccgggtatggac
tctggtcctctgggctcaggcatcggctctggtattggttctagtctggggatgccaaca
gtaagcactgatccttttggcaccaggaagatgagcacaccaggcctgaatgcgccgcct
acctttcagcagactgacctttctcaggtgtggcctgaagcaaaccagcacttcagtaag
gagatagatgatgaagcaaacagttacttccagcgcatctacaaccacccacctcaccca
actatgtctgtggatgaagtactagagatgctgcagagattcaaggattcaaacatcaag
cgtgagcgagaggtgttcaattgtatgcttcggaacttgtttgaggagtaccgattcttt
ccccagtacccagacaaggagctgcacatcactgcctgtctttttggaggcattatcgag
aaggggcttgtcacctacatggccctaggcttggccctccgatatgttcttgaagcctta
agaaaaccctttggatccaaaatgtattactttggaattgctgccctagataggttcaaa
aacagactaaaggactatcctcaatattgtcaacacctggcttcaattggccacttcttg
caattcccccaccatttacaagagtgtgtacagtatatagagtatggccaacagtcacgg
gaccctcctgtgaagatgcaaggctccatcaccacgcctggcagtctagcactagcacaa
gttcaagcccaggcacagtcgcagcaaccaggtggccccaaagccccacaaccaggtcag
cccagcactcttgtcaccaccacaactacaacaactacagcagccaagactaccactata
acaagaccgacacccagcagcttcaagaaggatgtgcctccctccataaacactaccaac
attgacaccctgctggtggccacggatcaaacggaaaggattgtagagcctccggacaat
gtacaggagaagattgcttttatcttcaacaacctgtcacagtccaacatgacacagaag
gtagaggagttgaaagagactgtgaaggaggagttcatgccctgggtgtctcagtacctg
gtgatgaagcgtgtcagcattgagccgaacttccacagtctctattccaattttttggac
actctcaagaacccagagtttgttaagatggttctcagtgaaacttataggaacatcaag
gttctgttgacctctgacaaggcagctgccaatttctctgatcgctctctgctgaagaac
ctgggccactggctgggcatgattacactggctaaaaacaagcctatcctctatactgat
ctggaagtgaagtctctgctcttggaggcctacgtgaaaggccagcaggagctgctttat
gtggttccctttgtggccaaagttttggaatccagtctacggagcatggttttcagaccc
cagaacccctggaccatggccatcatgaatgttctcgctgaactgcatcaggaacatgac
ctcaagctgaacttaaagtttgagattgaagttctgtgtaagaacttgtctctggacatt
aatgagctcaagccaggaaacctgctgaaggacaaggagaagttaaagaacttagaggag
cagctgtctgcaccaaagaaagagacaaagcctccagaggaaatgctgccagcctctacc
acaggagactttgttccatttgcagctcctccctccaccccagctcccaccaccaccacc
accaccactaccacctgtacaaccactgggcccccaaccccacagttcagttatcatgac
atcaatgtgtatgccttggcaggcctggccccacacatcaatataaatatcagtattcct
ctgctacaggctcatccccaattgaagcagtgtgtacggcagtcggtggagcgggctgtc
caggagctggtgcaccctgtagttgatcgctctatcaaaattgccatgacaacctgtgag
cagattatcaggaaggactttgccctggattctgaggagtcacgtatgcgtgtggctgcc
caccatatgatgagaaacctgactgctggcatggccatgatcacctgtcgtgagcccctg
ctcatgagcatcgccaccaaccttaagaacagttttgctgctgcacttagagcaccaaca
acccaacaaagggaattgatggaggaggctgcagctaggattgcgcaagacaactgtgaa
ttggcatgttgctttattcagaaaacagctgtggagaaggctggccctgaaatggacaag
agactagccacggagtttgagctgaggaagcatgcacggcaagagggacgtcgttattgt
gaccctgttgttttgacttaccaggctgaacgtatgcctgagcagatcagacttaaggtg
ggaggcgtagaccctaagcaactagctgtgtatgaggagtttgccaggaatgttccaggt
ttcttacccagtaatgatctctcccaacctactggtttcttggctcagcccatgaagcaa
caggcatgggccacagatgatgtggctcagatctatgataagtgcatgacagacttggag
cagcatcttcatgccatccctcctgcccttgccatgaaccctttgacccaggccgtgcga
tgccttttggaagctgttgctgtggcgagaaactccagagatggcattgctgcacttggc
ttactgcagaaggctgtggaaggtcttctggatgctactagtggggctgatgctgacttg
ctgcttcgctacagagagtgccacctgttggtgcttaaagccctacaggatgggcgtgcc
tatggaccacagtggtgcaataagcagattactaggtgtctgattgaatgccgtgatgag
tacaaatataatgttgaggcagtggagcttctgatcaggaaccatcttgtcaatatgcag
cagtatgacctgcacttagcacagtcaatggaaaatggactgcactacatggcagttgca
tttgccatgcagttggtaaagctgctcctggtagatgaacgcagtgtcagccacgtcaca
gaggctgacctcttccacacaattgagactttaatgaggacctgtgcacactccagagcc
aatgcacctgagggacttccccagctgatggatgttgttcgctccaactatgaggccatg
attgacagggcccatggcggacctaacttcatgatgcactctgggatttcacaggcttca
gaatatgatgatcctccaggcctaagggagaaggcggagtacctcctgagggagtgggtc
aacttgtatcactcagctgctgctggcagggatagcaccaaagctttctctgcctttgtt
ggccagatgcaccagcagggtatcttgaagacagatgacctgatcacaaggttcttccgg
ctgtgcacagaaatgtgtgtagagataagctatcgggcacaagctgagcagcagcacaat
ccagctgccagtgcagctatcatcagggccaagtgttaccacaatctggatgcttttgtt
agactcattgcactgctggtcaaacactctggagaggccacaaacacagtgacaaaaatc
aacctcctcaacaaggtgctgggtattgtggttggggtgttgatccaggaccatgatgtt
cgtcagacagaattccagcagctgccataccaccgcattttcatcatgctgctgttggag
ctcaatgcccccgaacatgtcctcgagaccatcaacttccagacactcactgctttctgc
aataccttccacatcctgaggcccaccaaagcacctggctttgtgtacgcctggctggaa
cttatctcccatcgcatcttcatcgccaggatgttggcacacacaccacaacagaagggt
tggcccatgtatgcacagctgctgattgatctcttcaagtacttggctcctttcctgagg
aatgtcgagctcaacaaacctatgcaaatcctctacaagggcacactgcgagttctgcta
gttctgctgcatgacttcccagagttcctttgtgactaccattatggcttctgtgatgtt
attccacccaactgcatccaactccgcaacctcatcctcagtgcctttccgcgcaacatg
aggctccctgatcctttcacaccaaatctcaaggtggacatgctgagtgagatcaacatt
gctcctcgtatcctcaccaacttcacaggcgttatgccttcacagttcaagaaggatctg
gactcgtatctgaagacccgctcaccagtcactttcctgtccgagctccgtagcaacctc
caggtgtctaatgagccaggaaaccgctacaacatccagctgatcaatgctctggtgttg
tatgtaggaacacaggcaatcgctcacatccacaacaagggcagcaccccctccatgagc
acgatcactcactctgcacacatggacatcttccagaacctggctgtagacctagacaca
gaggggcgttacctgttcttgaatgcaattgccaatcagctgcgctatcccaacagccac
actcactatttcagttgcaccatgctctatctgtttgctgaggccaacacagaggccatc
caggagcagatcaccagggttctgttggagaggctgatagtgaacaggcctcacccatgg
ggtcttctgatcaccttcatcgagctgattaagaaccctgccttcaaattctggagccat
gactttgtacactgtgcccctgagattgaaaagctgttccagtcagtagcccagtgctgc
atgggacagaagcaggcccagcaggtgatggaaggcaccagtgccagctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (5)   
   Pfam (5)   
All databases (23)   

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