KEGG   Monopterus albus (swamp eel): 109973547
Entry
109973547         CDS       T05607                                 
Name
(RefSeq) hypoxia-inducible factor 3-alpha-like isoform X1
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb04137  Mitophagy - animal
malb04140  Autophagy - animal
malb04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:malb00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    109973547
   04137 Mitophagy - animal
    109973547
   04148 Efferocytosis
    109973547
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:malb03000]
    109973547
Transcription factors [BR:malb03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    109973547
SSDB
Motif
Pfam: PAS_11 PAS_3 HIF-1 PAS PAS_9 PAS_4 HLH
Other DBs
NCBI-GeneID: 109973547
NCBI-ProteinID: XP_020478880
Position
Unknown
AA seq 695 aa
METKGELVVVKRTSSEQRKLRSRDAARCRRSQETEVFYELARTLPLPRRVSTHLDKAAIM
RITLSFLRMHYLLQPGDNHKEKSEEEEEVEDPMDAFYPQALAGFIMVTTEEGDMIYLTEN
VSRHVGITQLELLGQSIYDFVHPCDQEELRDLLTPRPGLSKKWQTEQQSERNFFLRMKST
LTNRGRTVNLKSATWKVLHCTGHMRRFGGGSTSPPAARVMILLCEPIPHPSSVEFPLDTC
TFLTRHSMDLRFTHCEGRWDEQPGAERKSLNVTVLHTFSSVFRVKELVGYRPDDLIGRSA
YEFHHALDSDHVNKSLHTLLSKGQVSTSHYRFLANSGGFVWAETQATVLYSSKTSQPEAI
ICLNFILSAVEQPDVVFSLEQIRCDSLSKTAPEDCGTSDTCDPDPESELVIDSSQPEEGG
SSPSSVADLFVNLQEKPKQLVQLSPDAGDTAVPLAKDFVELSFASPPSPNCMPEHPQDLC
TPQLRQLLTPIFNPITPPPSSPSSSPASEPALSPWKEEEEKMDTSEVEKFFAVCPEDGPQ
KGQTVEGMEGMDLDMLAPYISMDDDFQLTFLSSLPEKADRPSSETPTVTVNRKRSHKPDV
EVPQLPIPDKRQKQHPSSMEEEEELLLSHRLLGCLEEANQSDLILDPDPGPGSQLLTDRD
PVLGGIQGLCDTAALMRDFFVPHPPDLSPPLSPMT
NT seq 2088 nt   +upstreamnt  +downstreamnt
atggagacgaaaggagagcttgtcgttgtcaaacgaaccagttcagagcagaggaaactg
cgttctcgtgacgcagccaggtgtaggcggagtcaggagacagaggtgttttatgagctc
gcccgcactctgccacttcctcgcagagtgtccacacacctggacaaagctgccatcatg
aggatcaccctcagcttcctgcggatgcattacctcctgcagcccggtgacaaccacaaa
gaaaagtctgaagaggaggaggaggtagaggatccaatggatgcattctatcctcaggcg
ctggctggcttcatcatggtgacgactgaggaaggagacatgatctacctgacagaaaac
gtcagcagacacgtgggcatcacacagctggagctgctgggtcagagtatttatgacttt
gttcacccctgtgatcaggaggagctgcgagacctgctaactccacgtccaggcttgagt
aaaaaatggcagacagagcagcagagcgagaggaacttcttcctgcgaatgaagagcaca
ctgaccaacagggggcgcaccgtcaacctcaagtctgccacctggaaggtgctccactgc
acaggccacatgcgccgctttggtggcggctccacgtcgccccctgcagccagagtgatg
attctgctgtgtgagcccatccctcacccgtccagcgtggagttccctctggacacctgc
accttcctcacgcgccacagcatggacctgcgcttcacacactgcgagggcaggtgggac
gagcagcctggagcagagaggaaatctctgaacgtcactgtattacacactttttcttct
gttttcagggtgaaagagttggtgggatacagacctgatgatctgatcggtcgctcggcc
tacgagtttcatcatgccctggactctgatcatgtcaacaaaagcctgcacacattactg
tccaaaggtcaggtgagcaccagccactaccgtttcctggcaaacagcggcggctttgtg
tgggcggagacccaagctaccgtcctctacagcagcaagacatcgcagcccgaagccatc
atctgcctcaacttcatcctcagtgccgtggagcagccagacgtagttttctcactagag
cagatccgttgtgacagtctgtctaaaactgcaccagaggactgtgggacatccgacacc
tgtgaccctgatcctgaaagtgagcttgtcatcgactccagtcagcctgaggagggaggg
tcaagccccagcagcgtcgcagacctcttcgttaacctgcaggagaagccaaagcagctt
gtccagttgtctcctgatgctggagacacagctgtgccactggcaaaagattttgttgag
ctgtcgttcgccagtccgcccagtccgaactgcatgccggagcaccctcaggacctgtgc
actccacaactgcgtcagctcctcacacccatcttcaaccccatcaccccgccgccttca
tccccctcatcttcacctgcttctgagccagcactgagtccttggaaggaggaggaagag
aagatggataccagcgaggtggagaagttcttcgccgtttgtcccgaggatggtccacag
aaaggacaaacagtggagggcatggaggggatggatctggacatgttggctccctacatc
tctatggacgacgacttccagctgaccttcctcagcagcttgccagagaaagcggacagg
ccttcgtctgagacacctacagttacagtcaacaggaaacgcagccacaagccagatgtg
gaggtgccccagctgccaattccagacaagaggcagaagcaacatccttcctccatggaa
gaggaagaggaacttcttctcagccacagattactgggctgcctggaggaagccaaccaa
tcagatctgatcttggacccggacccaggcccagggagtcagctgctcacagacagagac
cctgtgttaggaggcatacaaggactgtgtgatactgcagctctgatgagggacttcttc
gtacctcacccacctgacctgtctccgcctctctcaccgatgacttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (5)   
   RefSeq(pep) (5)   
DNA sequence (5)   
   RefSeq(nuc) (5)   
Protein domain (7)   
   Pfam (7)   
All databases (27)   

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