KEGG   Monopterus albus (swamp eel): 109974312
Entry
109974312         CDS       T05607                                 
Symbol
prpf19
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb03040  Spliceosome
malb04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:malb00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    109974312 (prpf19)
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    109974312 (prpf19)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:malb03041]
    109974312 (prpf19)
   04121 Ubiquitin system [BR:malb04121]
    109974312 (prpf19)
   03400 DNA repair and recombination proteins [BR:malb03400]
    109974312 (prpf19)
Enzymes [BR:malb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     109974312 (prpf19)
Spliceosome [BR:malb03041]
 Complex B
  Other components
   Prp19 complex
    109974312 (prpf19)
 Complex C
   Prp19-CDC5 complex
    109974312 (prpf19)
Ubiquitin system [BR:malb04121]
 Ubiquitin ligases (E3)
  U-box type E3
   109974312 (prpf19)
DNA repair and recombination proteins [BR:malb03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    109974312 (prpf19)
SSDB
Motif
Pfam: WD40 Prp19 ANAPC4_WD40 NBCH_WD40 U-box PROPPIN Nup160 Cytochrom_D1 Ge1_WD40 zf-Nse ATG16
Other DBs
NCBI-GeneID: 109974312
NCBI-ProteinID: XP_020480109
Position
Unknown
AA seq 504 aa
MSLVCAISSEVPEHPCVSPVSNQVFERRLIEKYIAENGTDPMNGQPLSEEQLVDIKVSHP
IRPKAPXTSIPAILKSLQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARLT
KEVTAAREALATLKPQAGLVAPQAIPASQPAAAGAGGEPMEISEQVGMTPEIIQKLQDKA
TILTTERKKRGKTVPEELVRAEDLGKYRQVASHAGLHSASVPGILALDLCPSDTNKVLTG
GADKNVVVFDKKDEQIVATLKGHTKKVTSVIYHPSQSVVFSASPDTTIRVWSVTGGNCVQ
VVRAHEAGVTGLSLHATGDYLLSSSEDQYWAFSDIQTGRVLTKVTDESAGCALTCAQFHP
DGLIFGTGTADSQIKIWDLKERTNVANFPGHSGPVTSIAFSENGYYLATGAQDSSLKLWD
LRKLKNFKTITLDNNYEVKSLVFDQSGTYLAVGGSDIRVYICKQWSEVLNFTDHTGLVTG
VAFGENAQFLTSAGMDRSLKFYSL
NT seq 1515 nt   +upstreamnt  +downstreamnt
atgtctttggtttgtgcaatctccagtgaggtgccggagcacccgtgtgtctctccggtc
tcaaaccaggtgtttgaacgcaggctgatagagaagtacatcgcagagaatgggacggac
ccgatgaacggacaacccttgtctgaagagcagctcgtagatatcaaagtctcacatcct
attagaccaaaggcaccantcacaagcatccctgccattctcaagtcccttcaagatgag
tgggatgctgttatgctccacagcttcaccttgcggcagcagctgcagaccactcgccaa
gaactgtcacatgcactctaccaacacgatgccgcctgcagagtcatcgctcgactcacc
aaagaggtcactgctgcgagagaagccctcgccacactcaagccccaagctggattggtt
gctcctcaggcaattcctgcctctcagccagctgcagcaggtgcaggtggagagcctatg
gagattagtgaacaggtgggaatgaccccagagatcatccagaagctccaagacaaagct
actatcctcaccacagagagaaagaagagaggaaagactgtgccagaggagctggtcaga
gcagaggatctcggtaaataccgccaagtggcttcccatgctggtcttcatagtgccagt
gttcctggtattctggctttggatctgtgtccctcagacaccaacaaagtgctcacgggt
ggagctgataaaaacgtggtggtgtttgataagaaggacgagcagattgtggcaacactt
aagggtcacaccaagaaggttacctctgtcatttaccatccatctcagtctgtggtcttc
tctgcatctccagacaccaccatccgtgtgtggtctgttactggaggcaactgtgtccag
gttgtgcgtgcccatgaggcaggtgtcactggactctctctacatgctactggggactac
ctgctcagctcttctgaggatcagtactgggccttttctgatatccagactggcagagtc
cttaccaaagttactgatgaaagtgctggctgcgctctcacctgtgctcagttccaccct
gatggtctcatttttggcactgggacggctgactctcaaatcaagatctgggatctgaag
gagcgcaccaatgtggccaacttccctggccactctggtcctgtcacctccattgctttc
tctgagaacggatactatctggccacaggtgcccaggatagctctctgaaactgtgggat
ctgaggaaactgaagaacttcaagaccatcactctggacaacaactatgaggtgaagtcc
ctcgtgttcgatcagagtggcacctacctggctgtaggagggtctgacatccgcgtatac
atttgcaagcagtggtctgaggtcctcaacttcacagaccatacaggattggtgactgga
gtggcctttggagagaatgctcagttcctaacctctgcaggaatggacagaagtctcaaa
ttttacagtttgtaa

  All links  
Ontology (5)   
   KEGG BRITE (5)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (11)   
   Pfam (11)   
All databases (26)   

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