KEGG   Monopterus albus (swamp eel): 109974393
Entry
109974393         CDS       T05607                                 
Symbol
utp4
Name
(RefSeq) LOW QUALITY PROTEIN: U3 small nucleolar RNA-associated protein 4 homolog
  KO
K14548  U3 small nucleolar RNA-associated protein 4
Organism
malb  Monopterus albus (swamp eel)
Pathway
malb03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:malb00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    109974393 (utp4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:malb03009]
    109974393 (utp4)
Ribosome biogenesis [BR:malb03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    109974393 (utp4)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 PROPPIN CPSF_A Ge1_WD40
Other DBs
NCBI-GeneID: 109974393
NCBI-ProteinID: XP_020480228
Position
Unknown
AA seq 683 aa
MGEFKVHRVRFFDYMPGAITAMAFNXSERLALARADGAVEIFNFADSYFQEKVMPGQDGR
AAEALCWVSQRLFSAGLNGHITEYDLENLRPRHTVAAYGGPIWNISSNSQGTLLAVGCED
GTVKMFEIQQERIQFQRNLDRQKGRIVSLSWHSSGMLIAAGMMGMIRIFDADTGHATQRL
LVERGIGASKSKEVVVWCVAFLSDHTIISGDSAGMVQIWDGFTGTLVRTHLVTKWDVLAL
SVSQDESSLVAGTSEGTVIQFQFISSTVDQQKKEWVRTRTFKNHSHDVRALAHTETAVVS
GGMDTQLVVRPLLDKVEKNTQESALRKIAFPHRSLVCCAKKAGQLLFQFAEHLELWRLGE
SDGHGKAGDLLPVKRKPEKLLQLKKKGDNGVCVVFLSFEPGWLAYSTVSSVRLYRLQYDN
NISISKVSRLPKDLSSAHQLCFSSDSSKLFASTSHSSVVVIGLDQLECKYLHTLKPKSGS
RQPVHLMFASDDGKWLATAATDCRVHVYNLNKQKLHCTVPVYSSCPTAIAIHPMTGNLIM
AHADQQIFEYSLLHKEYTEWSRKLQKRGLHPLWLERDTPITHITFNPRNPAHIIVHDMFM
LCIIDQSLPLPDATTRLYNQMTLRSVPEQERLRHSHAFKICKSFQHLMCVSLLEDQSLVV
VERPLLDIVSQLPAPVRRKTFAT
NT seq 2052 nt   +upstreamnt  +downstreamnt
atgggcgaatttaaggtgcaccgtgtccggttcttcgactacatgccaggtgcgatcaca
gccatggcgtttaacnnatcggagcggctggctctggcccgggctgatggggccgtggag
atcttcaactttgctgatagttactttcaagaaaaggtgatgccaggacaggacggcagg
gctgctgaggctctgtgttgggtgagccagcgtctcttcagtgctggactgaatggacac
atcacagagtatgacctggaaaacttaagacccagacacactgtggcagcctatggagga
ccaatctggaacatcagcagtaacagccaaggaacactgctagcggtgggttgtgaagat
gggacagtgaaaatgtttgaaatacagcaggagaggattcaatttcaaagaaatcttgac
agacagaaaggtcgtattgtctctctgtcctggcattcctcaggcatgctgattgctgct
ggcatgatgggcatgatcagaatttttgatgctgacacaggccatgccacacaacgactg
ctggtggaaagaggtattggagcatccaagagcaaagaggtggtggtttggtgtgttgca
ttcctctctgaccacactatcatcagtggtgactctgcaggaatggtccagatctgggac
ggatttacaggaactctggtcagaactcacctggttaccaagtgggacgttctggctctt
tctgtttcacaggatgagagcagtctggtagcaggtacatcagagggtactgtcatccag
ttccagttcatctcctctactgtggaccagcagaagaaggagtgggtcagaactaggacc
tttaaaaaccactcccatgatgtgagggcacttgcccacaccgagactgctgtagtatct
ggaggtatggacacccaactggtagtgcgacccctgctggacaaggtggaaaagaacacc
caggagtcagcactgcgcaaaatagctttcccacatagaagcctcgtttgttgtgcaaag
aaagcagggcagctgcttttccagttcgctgaacatttagagctgtggagactaggggaa
agcgatggacatggaaaggctggtgaccttctacctgtgaagaggaaaccagaaaaactg
ctccagctgaagaagaagggagataatggggtctgtgttgtctttctcagctttgagcca
ggctggctggcctactctactgtctccagtgtccgtctctacaggttacaatacgacaac
aacatcagcatcagcaaggtgtccaggctacccaaagacctttcctcagcccaccagctc
tgcttctcctctgactcttccaaactctttgcttccaccagtcattcttcagttgttgtt
atcggcctcgaccagctggagtgcaaataccttcataccctcaaacccaagtcaggctcc
agacagccagtgcacctgatgtttgcaagtgacgatggcaaatggctcgctacagcagcc
acagactgcagggttcacgtctacaatcttaacaagcagaagcttcattgtacagttcca
gtgtatagttcctgtcccactgctatagcaatccacccaatgactggcaacctcatcatg
gcacatgctgaccaacagatctttgagtactccctgctgcacaaggagtacactgagtgg
agtcggaagctgcagaaacgaggcctgcaccccctgtggctggagagggacacacccatc
actcatatcaccttcaatcccagaaacccagctcacatcattgtacacgacatgttcatg
ttgtgcatcattgaccagagtctgccactccctgatgcaacaactcggctctacaaccag
atgacactgaggagtgttcctgagcaggagcggctcagacacagtcacgccttcaagatc
tgcaagagttttcagcacctcatgtgtgtgagtttattggaggaccagtctctggttgta
gtggagcgccccctgctggacatcgtttctcagctgcctgcacccgtcaggaggaagaca
tttgccacataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (5)   
   Pfam (5)   
All databases (15)   

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