KEGG   Pseudoduganella albidiflava: EYF70_06065
Entry
EYF70_06065       CDS       T05903                                 
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
mali  Pseudoduganella albidiflava
Brite
KEGG Orthology (KO) [BR:mali00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mali03021]
    EYF70_06065 (rpoS)
Transcription machinery [BR:mali03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EYF70_06065 (rpoS)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r3 Sigma70_r1_2 KORA
Other DBs
NCBI-ProteinID: QBI00468
UniProt: A0A411WV13
Position
1418996..1420045
AA seq 349 aa
MSSSPNDPLDDDSLPDDLADENFVGDSLADERLAEDGDDDSGGGDSGSVPVAGRGAALAS
VDELKKVLAAELSTDTTQHYLNQIGTRPLLTAPQEVHFATLAKAGDFAARQTMIEHNLRL
VVSIAKHYINRGVVLLDLIEEGNIGLMRAIDKFEPERGFRFSTYATWWIRQSIERAIMNQ
ARTVRLPVHMVRELNQILRGKYHLEAQHHNGKDASAEDIAHLVGRPVEEVQDILALSEHA
TSLDAPLDNDPQSSLMDMLPGDADDSPDARAEHQEMTHLVRDWLSRLPDKQRIVVMRRFG
LDNDDPATLETLAEEMGVTRERVRQIQQEALVKLKRAMAARGVVRDSLL
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgtcaagctcgccgaacgatcctctggatgacgactccctcccggacgacttggcggac
gagaatttcgtgggcgacagcctggccgacgagcgccttgccgaagatggcgacgatgac
agcggcggcggcgacagtggcagcgtcccggtcgccggccgcggtgccgcgctggccagc
gtggacgagctgaagaaggtgctggccgccgaactctccaccgacaccacccagcattac
ctgaaccagatcggcacccggcccctgctgacggcgccccaggaagtccatttcgccaca
ctggccaaggcgggcgatttcgccgcccggcaaaccatgatcgagcacaacctgcggctc
gtcgtctcgatcgccaagcactacatcaaccgcggcgtcgtgctgctcgacctgatcgag
gaaggcaatatcggcctgatgcgggcgatcgacaagttcgaacccgagcggggcttccgc
ttttccacctatgcgacctggtggatccgccagagcatcgaacgcgccatcatgaaccag
gcgcgcacggtgcggctgccagtgcacatggtgcgcgagctgaaccagatcctgcgcggc
aaataccacctcgaggcgcaacaccacaacggcaaggatgccagcgccgaggatatcgcc
cacctggtcggccggccggtggaagaggtgcaggacattctcgcgttgtccgagcatgcc
acgtcgctcgatgcgccgctcgacaacgatccgcagtcctcgttgatggacatgctgccc
ggcgatgcggacgacagcccggatgcgcgcgccgaacaccaggaaatgacgcacctggtg
cgcgactggctgtcgcggctgccggacaagcagcgcatcgtcgtcatgcgccgtttcggc
ctggacaacgacgatccggccacgctggaaacgcttgccgaggaaatgggcgtgacccgc
gagcgcgtgcggcagatccagcaggaagcgctcgtcaagctgaagcgggccatggccgcg
cgcggcgtggtgcgcgattcgctgctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (11)   

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