KEGG   Pseudoduganella albidiflava: EYF70_24760
Entry
EYF70_24760       CDS       T05903                                 
Name
(GenBank) pseudouridine synthase
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
mali  Pseudoduganella albidiflava
Brite
KEGG Orthology (KO) [BR:mali00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mali03009]
    EYF70_24760
   03016 Transfer RNA biogenesis [BR:mali03016]
    EYF70_24760
Enzymes [BR:mali01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     EYF70_24760
    5.4.99.29  23S rRNA pseudouridine746 synthase
     EYF70_24760
Ribosome biogenesis [BR:mali03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    EYF70_24760
Transfer RNA biogenesis [BR:mali03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    EYF70_24760
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: QBI05271
UniProt: A0A411X8B4
Position
complement(5952042..5952908)
AA seq 288 aa
MRDGVTPSYLWLPEGDWPDLITFMVANYPAVTEAQWRERMARGDVVDAQGRALQPSSPYR
RNLRIFYYRELEYEAPIPFEEEVLYQDEHIVVADKPHFLPTIPTGRFLKETLLVRLRARL
GIEELVPIHRLDRETAGIVVFSRNLDSRGAYQSLFQQRVVQKEYEALAGPLPGRTFPFSY
RSRMVQGDKFFTMKEAPGEPNSETMIDIAGQRGEHVLYRLWPHTGRQHQLRVHLAALGIP
IVNDAFYPVALPCKGEDVSAPLKLLARAIGFPDPLTGEWRYFESRRSL
NT seq 867 nt   +upstreamnt  +downstreamnt
atgcgcgacggcgtcacgcccagctacctgtggctgcccgagggcgactggcccgacctg
atcaccttcatggtggcgaactatcccgccgtgaccgaggcgcagtggcgcgagcggatg
gcgcgcggcgacgtggtcgacgcgcagggcagggcgctgcagccgtcgtcgccgtatcgc
cgcaacctgcgcatcttctactaccgcgagctggagtacgaggcgccgattccgttcgag
gaagaggtgctgtaccaggacgagcacatcgtagtcgccgacaagccgcatttcctgccc
acgattcccaccggccgcttcctgaaggagaccttgctggtgcgcctgcgcgccaggctc
ggcatcgaggaactggtgccgatccaccggctcgaccgcgaaaccgccggcatcgtcgtc
ttttcccgcaacctcgacagccgcggcgcgtaccagtcgctgttccagcagcgtgtggtg
caaaaggagtacgaggcgctggccggcccgctgccgggacgcaccttcccgttcagctac
cgcagccgcatggtgcagggcgataagttcttcacgatgaaggaagcgccgggcgagccg
aattcggaaaccatgatcgatatcgccgggcagcgcggcgaacacgtgctgtatcgcctg
tggccgcacacggggcggcagcaccagttgcgcgtgcacctggccgcgctgggcatcccg
atcgtcaacgatgcgttctacccggtggcgttgccatgcaagggcgaggatgtgtccgca
ccgctgaaactgctggcgcgggcgatcggcttccccgatccgctgaccggggaatggcgc
tacttcgagagccgccgcagcctgtag

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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