KEGG   Mesorhizobium amorphae: A6B35_05900
Entry
A6B35_05900       CDS       T04446                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
mamo  Mesorhizobium amorphae
Brite
KEGG Orthology (KO) [BR:mamo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mamo03021]
    A6B35_05900
Transcription machinery [BR:mamo03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     A6B35_05900
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 Sigma70_ECF DUF742 GerE HTH_23 DUF134
Other DBs
NCBI-ProteinID: ANT49509
Position
1228797..1229363
AA seq 188 aa
MTAATETDRALVDRVAKGDRAAVRLLFMRHHARVYRFVVRQTGSEMMADDIANEVFLELW
RQAPGFEGRSEVSTWLLGIARFKALSLLRKKKEDWIDDDDAAQIPDSADTPEVVTMKDDK
AAALRRFIDALPEEHRTVIDLAYYHGQSVTEIGEVLGIPVATVKTRMFYARKKLGEALKA
AGYDRGWP
NT seq 567 nt   +upstreamnt  +downstreamnt
atgacggcggcgacggagaccgatcgcgcgcttgtcgaccgggtcgcgaagggcgacagg
gccgccgtgcggctcctgttcatgcgccaccacgcgcgggtttaccgcttcgtggtgcgc
cagacgggatcggaaatgatggccgacgatatcgcgaacgaggtctttctcgagctctgg
cgccaggcgccgggcttcgaagggcgctcggaagtctcgacatggctgctcggcattgcc
cgcttcaaggcgctgtccttgctgcgcaagaaaaaggaagactggatcgacgacgacgac
gcggcgcagatccccgacagcgccgacacgccggaagtcgtcaccatgaaggacgacaag
gctgcggccctgcggcggttcatcgatgcgctgccggaagagcaccgaacggtgatcgac
cttgcctattaccacggccagtcggtgaccgagatcggcgaggtgctcggcattccggtc
gccaccgtcaagacccggatgttctacgcccgcaagaaactcggcgaagccttgaaggcc
gccggttacgacagggggtggccatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (8)   
   Pfam (8)   
All databases (14)   

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