KEGG   Mycoplasma amphoriforme: MAMA39_02500
Entry
MAMA39_02500      CDS       T06380                                 
Name
(GenBank) unnamed protein product
  KO
K02470  DNA gyrase subunit B [EC:5.6.2.2]
Organism
mamp  Mycoplasma amphoriforme
Brite
KEGG Orthology (KO) [BR:mamp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mamp03032]
    MAMA39_02500
   03400 DNA repair and recombination proteins [BR:mamp03400]
    MAMA39_02500
Enzymes [BR:mamp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     MAMA39_02500
DNA replication proteins [BR:mamp03032]
 Prokaryotic type
  DNA Topoisomerases
   MAMA39_02500
DNA repair and recombination proteins [BR:mamp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      MAMA39_02500
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C Toprim HATPase_c TOPRIM_C HATPase_c_3
Other DBs
NCBI-ProteinID: CDN40374
UniProt: A0A292IHF3
Position
334819..336783
AA seq 654 aa
MAKTEEIANYSADNIKVLEGLEAVRTRPGMYIGSTGQDGLHHMIWEIVDNAIDEVMAGFA
TIVKVTILDEERVFIEDNGRGIPTNIHPKTKKSGVETVLTVLHAGGKFDNTNYKVAGGLH
GVGASVVNALSDSFKVWVYRDKKVHFMEFERGGIPKGELKIIEELNELRTGTSVEFRPDF
TIMERFEYDSKKIQNRLQQLAFLNKNCRIIFEDKRVGKETNQEWLYSGGIKEYIEYLNSE
KEPLIPTIIYGEKEENTKVSNESNKSYNIKVEVAFQYNKTYNNSIYTFCNNIHTVEGGKH
DDGFKFAIAKIVNKYALEKKLLKKEDGDIKKEDICSGLTAIVSVKHPNPEFVGQLKLKLG
NSEVQTLTNNIVSEIFERFMMENPDESIPIIQKAIVEMNARKKALEARELTRRKSPFDSA
SLPGKLADCSTRDAEISEVFIVEGDSAGGSAKMGRNRYFQAILPLRGKIINVEKITSEEA
FRNAEVATIVTAVGAGVNPEFDLTKIRYNKIIIMTDADVDGAHIRTLLLTFFFRYMQPLI
ENGHVYIAQPPLFKVSFGKTNLYMNTESELEDWKQKNPNQKYDLQRYKGLGEMDAVQLWE
TTMDPEKRVLLKVSMEDAVVADKTFSLLMGEDSSPRKDYIEKNAKNVRNIDLQA
NT seq 1965 nt   +upstreamnt  +downstreamnt
atggctaaaacagaagaaatagctaattatagtgctgataatattaaagttttagaagga
ctggaagcggttcgaacaagacctggtatgtatattggatcaacaggtcaagatggttta
caccatatgatttgagaaatcgttgacaatgcaattgacgaagttatggctggctttgcc
accatcgtgaaagtgacaattttggacgaggaaagagttttcattgaagataatggccgg
ggaattcctaccaatattcatccaaaaacaaaaaaatcaggtgttgaaacagtattgacc
gttttgcatgcaggtggtaagtttgataacaccaattataaagttgcaggtggacttcat
ggagtaggtgcgtctgtagttaatgcattaagtgattcatttaaagtctgggtttatcgt
gataaaaaagttcactttatggaatttgaacgcggcggaataccgaaaggtgaattaaaa
atcattgaagaactaaacgagttgcgtacaggaacatcagttgaatttcgaccagatttt
acgattatggaaaggtttgaatacgattcgaaaaaaattcaaaatcgtttgcaacaatta
gcttttttaaacaaaaattgtcgaattatttttgaagataaacgagttggaaaagaaaca
aaccaagagtggctatacagtggtggtattaaagaatatattgaatacctaaattcggaa
aaagaacctttaattccgactattatttatggtgaaaaagaagaaaatacaaaagtttca
aacgaatcaaataagtcttataatatcaaagtcgaagttgcttttcaatacaataaaacc
tacaataactcaatctacactttttgtaataacattcatacagttgaaggcggaaagcac
gatgatggctttaaatttgctattgcaaaaattgtaaataaatatgctttagaaaaaaag
cttttaaaaaaagaagatggagatattaaaaaagaagatatttgttcgggattaactgct
atcgtttcggttaaacaccccaatcctgagtttgtaggtcagttaaaattaaaacttgga
aattctgaagttcaaactctcacaaacaatattgttagtgaaatttttgagcgctttatg
atggaaaaccctgatgaaagcattccaattattcaaaaagcaattgttgaaatgaatgca
cgtaaaaaagcactggaggctcgggaattaacaagaagaaaatcgccatttgattctgct
tctcttcctggtaagctcgctgattgttcaacaagagatgctgaaatatctgaagtattt
attgtcgagggagattcggcgggtggttcggccaaaatgggacgcaaccgatactttcaa
gcaatcttaccgttacgcggtaaaatcataaatgttgaaaaaattacatcagaagaagct
tttcgtaatgctgaagttgcaacaattgtaacggcggttggtgccggggttaatccagaa
ttcgatttaacaaaaattcgttataataaaatcattattatgaccgatgctgatgtggat
ggtgcccacattcggacgttattgttaacatttttcttcagatacatgcaaccattgatt
gaaaacggtcacgtttatattgcccaaccacctttatttaaagttagttttggaaaaact
aacctttacatgaatacggaaagtgaattggaggattggaaacaaaaaaaccctaatcaa
aaatatgatttgcaacgctataaaggattaggagaaatggatgcagtccaattgtgagaa
accacaatggatcctgaaaagcgcgtattacttaaagttagcatggaagatgctgtagtg
gctgataaaactttttcacttttgatgggtgaagattcttcaccacgaaaagattacatt
gaaaaaaacgctaaaaacgttcgtaatattgatcttcaagcataa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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