KEGG   Mycoplasma anseris: DP065_03200
Entry
DP065_03200       CDS       T06679                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
mane  Mycoplasma anseris
Pathway
mane03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mane00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    DP065_03200 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mane03021]
    DP065_03200 (rpoC)
   03400 DNA repair and recombination proteins [BR:mane03400]
    DP065_03200 (rpoC)
Enzymes [BR:mane01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     DP065_03200 (rpoC)
Transcription machinery [BR:mane03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     DP065_03200 (rpoC)
DNA repair and recombination proteins [BR:mane03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      DP065_03200 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 L_lactis_RepB_C Zn-ribbon_8
Other DBs
NCBI-ProteinID: AWX69728
UniProt: A0A2Z4NDY1
Position
735471..739844
AA seq 1457 aa
MKKSRKYASLEEDKIAKISLALATPEDVESWSHGEVTKPETINYKSYKPERNGLFDEIIF
GPMIDYRCPVCGHKYKKINEKSFCTKTELCKQEKVEILPKISRRNHMGHIKLNSPVVHFW
YFKVDHSIIYKLLGLRVGRNNDTVRRIDLENLIYYKSHIVLESGGLKALPKNTIIDINEA
AMIYKNALEELLSRFEEGTEDYDDIKETLDDLVEKATSKIGQDYGIDFYELNEVIEHYSE
AKIGTGALAIEYLLKNIDLKQEKEFVTAEIKKINDEEIKNGSKIASTAKQNREKLYKRLQ
VINAFIESKQKPTSMLIYNLPVIPADLRPLIQLDGGRHSTSDINELYRRVIIRNNRLKQW
QEKDAPTLVIQNELRMIQEAVDALIDNQRRSPNPVLSKDNRPFKSISDALTGKKGRFRQN
LLGKRVDYSGRSVIVVGPHLKMHQCGIPREMAAKLFEPWIIAKLIEKEVATTIKNAKKMI
EDQNPVIWPHVAETIKGRLVLLNRAPTLHRLSIQAFEPVLVRGKAIKLHPLVCTPFNADF
DGDQMAVHVPISEQALLESRELMLANKNILGPKDGEPIINPSQDMILGIYYLTIEEANAL
GEGRVFDNFDHMMRAYEAKKVSLHARVALPIEEVKSTKLFINPEDKPRYIISTVGKFIFN
NVFPKTFPFIYDNKVTKATSLEEYANGINKYIVPAGTNIPEYITYELPVLEAFNKKNIAK
IIRHAFDKYVATITLEDVASVIKCINDISISNIVLKFLELQTYNNKKLDKEHALILASFT
EEEINDLKSKTPERVNGADIPFSAQEKAQILDKVWFRYTNIVASILDEIKDLGFEYSTIS
GISISISDILETEKKEEYLAEGDQYIDQLKEYYNQGYITDDDRYSLTIKKWTEIKDKIQE
ELQTIIKNNPQNPVITMINSGARGNISNFVQLAGMRGLMANNTKTTKADAKNDRIVRSTV
EVPVKSSFIEGLTAFEFYSSTHGARKGLTDTALNTAKSGYLTRRLVDVAQNIVVRQENCG
SDYGYVARDIVDTKTKQVIVPLKERIVGRYTNKAILSKNGQEIIPRNTLITEKIAQNIID
EGFDSVEIRSILGCNTRNGVCKMCFGKDLATNRIVNIGEAVGIIAAQSIGEPGTQLTMRT
FHTGGVAGVEDITGGFTRLIELIDAHEQPWGRPATISPYKGTVTKIEIDEKNNFHHLVTI
ETKNSKNEIQHKKVFVETNKKLRVKVGDEVRIGAKLSEGPIILKDLLELTDTLTVQNYLL
KEIQRIYRIQGIAISDKYIEIIIRQMMSKIVIHDPGDSKFFAGAIVDIFDYQEENAQLLT
KGFKPAYGNVVIKGAKQVPLLSDSFLAAASYQETSKILVHAAISSRNDNLNGLKENIIVG
KKIPAGTALYPFEAHSKYDIKPAIKYFIDEEEQNEDEMDFTPLDLEAYNKEIEELEANEE
VYVEDESQEDDYYDDEE
NT seq 4374 nt   +upstreamnt  +downstreamnt
atgaaaaaatctagaaaatacgcttctttagaagaagacaagattgctaaaatttcactt
gcattagctactcctgaagatgttgaaagttgatctcatggtgaagtaactaaaccagaa
accattaactacaaaagttataaaccagaaagaaatgggctatttgatgaaattatcttt
ggtccaatgattgattatcgttgtcctgtttgtggtcataaatacaaaaaaattaatgaa
aaaagtttctgtactaaaactgaattatgtaaacaagaaaaagtagagattttaccaaaa
atttcaagaagaaatcatatgggtcatattaaattaaatagccctgttgttcatttttga
tattttaaagttgatcactcaattatttataaattattaggtttaagagttggaagaaac
aatgatacggttagaagaattgatttagaaaacttgatttattacaaaagccatattgta
ttagaatcaggtggtttaaaagctcttccaaaaaacactattattgatattaatgaagct
gccatgatttataaaaatgccttagaagaattattatctcgtttcgaagaaggaactgaa
gattatgatgatattaaggaaacacttgatgatttagtagaaaaagcaacttcaaaaatt
ggtcaagattatggaattgacttttatgaattaaatgaagttattgaacattattcagaa
gctaaaatcggaactggtgctttagcaattgaatatttattaaaaaatattgatttaaaa
caagaaaaagaatttgttactgctgaaattaagaaaattaatgatgaagaaattaaaaat
ggttcaaaaattgcttcaacagcaaaacaaaaccgtgaaaaactttataaacgtttacaa
gtaattaatgcttttattgaatctaaacaaaaaccaactagtatgttgatttataaccta
ccagttatcccagctgacttgcgtcctttaattcaattagatggtgggcgtcattcaaca
agtgatatcaatgaattataccgtcgggtaattattagaaataatcgtttaaaacaatga
caagaaaaagatgcgccaactttagttattcaaaacgaattaagaatgattcaagaagca
gttgatgctttaattgataaccaaagaagaagtcctaaccctgttttatcaaaagacaat
cgtccatttaaatcaattagtgatgctttaaccggtaaaaaaggtcgttttagacaaaac
ttattaggaaaaagagttgattattctggacgttctgttattgttgttggacctcattta
aaaatgcatcaatgtggtattcctagagaaatggctgctaaattatttgagccatgaatc
attgctaaattgattgaaaaagaagtggcaacaacaattaaaaatgctaaaaaaatgatt
gaagatcaaaacccagttatttgacctcatgttgctgaaacaatcaaaggaagattagta
ttattaaaccgtgcaccgaccttacaccgtttatcaattcaagcctttgaacctgtatta
gttaggggcaaagctattaaattacatccattagtatgtactccatttaatgctgacttc
gatggtgaccaaatggctgttcacgttcctatttcagaacaagctttattagaaagtcgt
gaattaatgcttgctaataaaaacattttgggtccaaaagatggagaaccaattattaac
ccttctcaagatatgattttaggtatttattatctaaccatagaagaagctaatgcctta
ggagaaggaagagtatttgacaactttgatcacatgatgagagcttatgaagctaaaaaa
gtttcattacatgcaagagttgctttaccaattgaagaagtaaaaagtactaaattattt
attaacccggaagacaaaccaagatacattatttcaactgttggtaaattcatttttaac
aatgtctttccaaaaacattcccatttatatacgacaacaaagtaacaaaagccacttca
ttagaagaatatgcaaatggaattaataaatacattgtgcctgctggaacaaacattcct
gaatatattacttatgaattgccagttctagaagcatttaataagaaaaacattgctaaa
atcattcgtcatgcctttgacaaatatgttgcgaccattactttagaagatgttgcttca
gttattaaatgtattaatgacatttcaatttcaaacattgttttaaaattcttagaattg
caaacatacaacaacaaaaaacttgataaagaacatgctttaattcttgcttcattcact
gaagaagaaatcaatgatttaaaatcaaaaactcctgaaagagtaaatggagctgatatt
ccattctctgctcaagaaaaagcccaaattttagataaagtatgatttagatatactaat
attgttgcctctattcttgatgaaattaaagatctaggatttgaatattcaaccatttca
ggtatttcaatttcaatttctgatattttagaaactgaaaagaaagaagaatatcttgct
gaaggagatcaatacattgatcaattaaaagaatattataatcaaggttatattactgat
gatgatagatattcattaactattaagaaatgaactgaaattaaagacaagattcaagaa
gaattacaaactattattaaaaataacccacaaaacccagttattaccatgattaactct
ggggctagaggtaatatttctaacttcgttcaattagcaggtatgcggggattaatggca
aacaacaccaaaactactaaggctgatgctaaaaacgatagaattgttagatcaactgtt
gaagttccggttaaatcttcattcattgaaggtctaactgcttttgagttctattcatca
actcacggagcaagaaaaggtctaaccgatactgctttaaacactgctaaatcaggttat
ttaactcgtcgtttagttgatgttgcccaaaacattgttgttcgtcaagaaaactgtggt
tcagattatggttatgtagcaagagatattgttgatactaaaacaaaacaagttattgtt
ccattaaaagaaagaattgttggaagatatacaaataaagctattttaagtaaaaatggg
caagaaattatccctagaaacactttaattactgaaaaaattgctcaaaatatcattgat
gaaggttttgattcagtagaaattagatctattttaggatgcaacaccagaaatggtgta
tgtaagatgtgttttggtaaagatttagcaaccaatagaattgttaatattggtgaagca
gttggaatcattgctgctcaatcaattggtgaacctggtactcaattaaccatgcgtact
ttccatactggaggggttgctggtgtagaagatattactggtggtttcactagattgatc
gaattaattgacgcccatgaacaaccttgaggtcgtccagcaactatttcaccttataaa
ggaactgtaaccaaaattgaaatcgatgaaaaaaataacttccaccatttagtaactatt
gaaaccaagaatagtaaaaatgaaattcaacacaaaaaagtctttgtggaaactaataaa
aaacttagagttaaagttggtgatgaagttagaattggagcaaaattatcagaaggtcca
atcattttaaaagacttattagaattaactgacactttaaccgttcaaaattatttatta
aaagaaattcaaagaatttatcgtattcaagggattgcaatttcagataaatatatcgaa
attattatccgtcaaatgatgtcaaaaattgtaattcatgatcctggtgattcaaaattc
tttgctggagcaattgttgatattttcgattatcaagaagaaaatgcacaattattaacc
aagggattcaaaccagcttatggtaatgtggtaattaaaggagcaaaacaagtgccttta
ttatcagattcattcttggctgctgcttcatatcaagaaacttcaaaaattttagttcat
gctgctatttcttcaagaaatgacaatttaaatgggttaaaagaaaacattattgttggt
aagaaaattccagctggaacagcattatatccttttgaagctcattcaaaatatgatatt
aaaccagctattaaatactttattgatgaagaagaacaaaatgaagatgaaatggatttc
actccattagatttagaagcatataataaagaaattgaagaattagaagcaaatgaagaa
gtttatgttgaagatgaatcacaagaagatgattactacgatgatgaagaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (17)   

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