KEGG   Mycoplasmopsis anatis: DP067_01660
Entry
DP067_01660       CDS       T06827                                 
Symbol
rnr
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
mani  Mycoplasmopsis anatis
Pathway
mani03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mani00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    DP067_01660 (rnr)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mani03019]
    DP067_01660 (rnr)
   03016 Transfer RNA biogenesis [BR:mani03016]
    DP067_01660 (rnr)
Enzymes [BR:mani01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     DP067_01660 (rnr)
Messenger RNA biogenesis [BR:mani03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     DP067_01660 (rnr)
Transfer RNA biogenesis [BR:mani03016]
 Prokaryotic type
  tRNA degradation factors
   DP067_01660 (rnr)
SSDB
Motif
Pfam: RNB CSD2 S1 OB_RNB
Other DBs
NCBI-ProteinID: AWX70066
Position
411845..414046
AA seq 733 aa
MDKKNIKTEIFEIINKFGPINFVQLVRKLKFLPSENKNVSKALIELEAELKIFKNWDGEY
YTPILHDEFDGVLKINSTGKFGFVTELNENELIPAEEIRDCFVAKYFFNSAMHDDLVHVK
VFFEDKTKEKTFGVITNIIERKTEELIGFLVSKNSFVDFKPLDNKFNNAKYRISDVKVNA
KINDLVIAKISKIQGDFIYVTIEEIITNKTDPKVFFKAFLEKVKVPKEFSSVMDSELKEI
PKSIENENFENRIDLRNELIVTIDGDDTKDFDDAVNVKRLENGNYLLGVHIADVSYYVTE
NSEIDKEALKRGTSIYLADRVIPMLPFELSNGICSLNPHEDRFAISALMEIDRNGNNVKT
EIFPSIIQSKYRLTYKQVNKFLEEKTLLNENVELTNMINLSYELSKILHEYKTRQGYIDF
EIEEPKIYLNEDGTVKDIVVGERGVSEVLIEDFMVRANEQVAEFLTSKKLPVMYRVHDAP
DEEKLSNLENVLNVLDIPFKKPQGILDPIKFAQIATEIKKYKYDEFIKLLFLRTMQKAKY
TSINIGHFGLASEFYCHFTSPIRRYPDLMIHRILRELVFNKNMDKLSHFNDIIEGIANQN
SSMEQSSVDIERNSNDLFYAEYFKNKIGQKFHAQIISVTKFGMFIEFPNKTDALVHKSTL
LDGEYEANETMTVLASSNRKFKIGQFIDVIVTGVDLVEGKVDAVLEEFYNDFLNNDKNKK
NFRSVKSEQIRKN
NT seq 2202 nt   +upstreamnt  +downstreamnt
atggataaaaaaaatattaaaactgaaatttttgagattattaacaaatttggaccaatt
aattttgttcaattagttagaaaattaaaatttttgcctagtgaaaataaaaatgtaagt
aaagctttgatcgagcttgaagctgaattaaaaatatttaagaattgagacggtgaatat
tacacaccgattttacatgatgaatttgatggagttttaaaaattaattcaactgggaaa
ttcggttttgtaactgaattaaatgaaaatgagttaattccagcagaagaaattcgtgac
tgttttgttgccaagtatttttttaatagcgcaatgcatgatgacttagttcacgttaaa
gttttcttcgaagataaaactaaagaaaaaacttttggtgtaattactaatattattgag
cgtaaaactgaagaattaataggttttttagtttcaaaaaactcttttgtagattttaaa
ccacttgataataaatttaataacgctaaatatcgtatttctgatgttaaagttaacgct
aaaattaatgatttagttattgccaaaatttctaaaatccaaggtgattttatttatgta
actattgaagaaattatcacaaataagactgatccaaaagttttttttaaagctttttta
gaaaaagttaaagttcctaaagaatttagctcagttatggatagtgagctaaaagaaatt
cctaaaagtattgaaaatgaaaactttgaaaatagaatcgatcttagaaatgaactaatt
gttacaattgatggtgatgatactaaagattttgatgacgcagttaatgttaaaaggtta
gaaaacggaaattatcttcttggagtgcacattgctgacgtttcatattacgttaccgaa
aactctgaaattgacaaagaagccttgaaaagaggaacaagtatctaccttgctgacaga
gttattccaatgctaccttttgaactttctaatggaatttgttcattaaatccacatgaa
gatagatttgcaattagtgccttaatggaaattgatagaaacggaaataatgttaaaact
gaaatttttccatcaataatccaaagtaaatatcgtttaacatacaaacaagttaacaag
tttttggaagagaaaactttattaaatgagaatgtagaattaacaaatatgatcaatctt
tcatatgaactttcaaaaattcttcacgaatacaaaactaggcaaggttacattgatttt
gaaattgaagaaccaaaaatttatcttaacgaagatgggacagtaaaagatattgttgtt
ggtgaacggggagtttctgaagtattaattgaagattttatggttagagctaacgaacaa
gttgctgaatttttaacaagtaaaaaacttccagttatgtatcgtgttcatgatgcacct
gacgaagaaaaactatcaaacttagagaatgttttaaatgtgttagatataccatttaaa
aaacctcagggaattttagacccaataaaatttgcacaaatcgctactgaaattaaaaaa
tataaatatgatgaattcataaaacttttattcttaaggacaatgcaaaaagctaaatat
acttcaataaatattggacactttggtttggcaagcgaattttattgccactttactagc
ccaattcgtagatatccagatttaatgattcacagaattttaagagaattagtgtttaat
aaaaatatggataaattaagtcattttaatgacattatcgaaggaattgcaaatcaaaac
tcttcaatggagcaatcaagcgttgatattgaacgtaattcaaatgatttattttatgct
gaatattttaagaataaaatcggtcaaaaatttcatgctcaaattattagtgttactaaa
tttggaatgtttattgaatttccaaataaaactgatgcacttgttcacaaaagcacatta
cttgacggcgaatatgaagctaatgaaactatgactgttttagcttcaagtaatagaaaa
ttcaaaattggacaatttattgacgttatagttactggagttgacttagttgaaggaaaa
gttgatgcggttctagaagaattttataacgattttctaaacaatgataaaaataaaaag
aactttagaagcgtaaaaagtgaacaaataagaaagaattaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (4)   
   Pfam (4)   
All databases (13)   

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