KEGG   Marisediminicola antarctica: BHD05_04805
Entry
BHD05_04805       CDS       T06401                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
mant  Marisediminicola antarctica
Pathway
mant03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mant00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    BHD05_04805
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mant03021]
    BHD05_04805
   03400 DNA repair and recombination proteins [BR:mant03400]
    BHD05_04805
Enzymes [BR:mant01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     BHD05_04805
Transcription machinery [BR:mant03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     BHD05_04805
DNA repair and recombination proteins [BR:mant03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      BHD05_04805
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L HHH_5
Other DBs
NCBI-ProteinID: QHO69065
UniProt: A0A7L5AH22
Position
1007816..1008814
AA seq 332 aa
MLIAQRPTLTEENITEFRSRFIIEPLEPGFGYTLGNSLRRTLLSSIPGAAVTSIRLDGVL
HEFSTVPGVKEDVTEVILNIKGLVVSSEHDEPITAYLRKQGAGEVTAADISAPAGVEIHN
PELVIATLNDKAKFELELTIERGRGYVSATQNRSEFSEAGQVPVDSLYSPVLKVTYRVEA
TRAGERTDFDRLVVDVETKSAITPRDAIASAGRTLTELFGLARELNTAAEGIEIGPAPVD
AVLSTELSMPIEDLDLSVRSYNCLKREGINTVSELVALSETQLMNIRNFGQKSVDEVRDK
LVEMGLSLKDTVPGFDGAHFYSGYDDAVEETN
NT seq 999 nt   +upstreamnt  +downstreamnt
gtgctgattgcacagcgtccaactcttaccgaagagaacatcaccgagttccgctcgcgg
ttcatcatcgagccgctcgaacccggtttcggttacacgctcggcaactcgcttcgccgc
accctgctctcttcgatccccggcgccgctgtcaccagcatccgcctcgacggagtgctc
cacgaattcagcacggttcccggggtgaaggaagacgtcaccgaggtcatcctgaacatc
aagggcctggttgtgtcgagcgagcacgacgagccgatcaccgcgtaccttcgcaagcag
ggcgctggtgaggtcaccgctgccgacatctcggctccggccggtgtggagatccacaac
ccggagctcgtcatcgcgacgctcaacgacaaggcgaagttcgaactcgagctgacgatc
gagcgtggccgcggctacgtgtcggcgacccagaaccgcagcgaattcagcgaggccggc
caggttccggtggactcgctctactcgcccgtgctcaaggtgacctaccgtgtcgaggcg
actcgtgccggtgagcgtaccgacttcgaccgcctcgtggtcgacgtcgagaccaagtcc
gcgatcaccccgcgcgacgccatcgcatccgccggccgcaccctgaccgagctgttcggt
ctggcgcgcgagctcaacacggcggcagagggcatcgagatcggccccgcgccggtcgac
gccgtcctctcgaccgagctgagcatgccgatcgaagacctcgacctctccgtgcgcagc
tacaactgcctcaagcgcgagggcatcaacaccgtgagcgaactcgtcgcactgtcggag
acgcagctcatgaacatccgcaacttcggacagaagtcggtggatgaggtcagggacaag
ctggtcgagatgggactctccctcaaggacaccgttcccggcttcgatggagcccacttc
tacagcggctatgacgacgccgtcgaagagaccaactag

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (14)   

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