KEGG   Marinobacter nauticus VT8: Maqu_1028
Entry
Maqu_1028         CDS       T00454                                 
Name
(GenBank) integration host factor, beta subunit
  KO
K05788  integration host factor subunit beta
Organism
maq  Marinobacter nauticus VT8
Brite
KEGG Orthology (KO) [BR:maq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:maq03032]
    Maqu_1028
   03036 Chromosome and associated proteins [BR:maq03036]
    Maqu_1028
   03400 DNA repair and recombination proteins [BR:maq03400]
    Maqu_1028
DNA replication proteins [BR:maq03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    Maqu_1028
Chromosome and associated proteins [BR:maq03036]
 Prokaryotic type
  Nucleoid associated proteins
   IHF (integration host factor)
    Maqu_1028
DNA repair and recombination proteins [BR:maq03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Facilitator
      Maqu_1028
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 HU-CCDC81_bac_1 HU-DNA_bdg Herpes_UL6
Other DBs
NCBI-ProteinID: ABM18120
UniProt: A1TZF1
Position
1177123..1177419
AA seq 98 aa
MTKSELVELIASKQTQLSVKDVELAVKSIIEHMSQSLADGQRIEIRGFGSFSLHHRAART
GRNPKTGDAVQLPAKFVPHFKPGKELREQVNDSMKKGF
NT seq 297 nt   +upstreamnt  +downstreamnt
atgacgaagtccgaactggttgaactgatcgcttcgaagcagactcagctctccgtaaag
gatgttgagctcgcggtgaaaagcatcatcgagcatatgtctcagtcccttgccgacggc
cagcgaattgagatccgtggatttggcagtttttccctgcatcatcgggctgcccgcacc
ggacgtaacccgaaaaccggagacgccgtgcaactgccagccaagtttgtgccgcacttc
aagcccggcaaagagctgcgagagcaggtcaacgacagcatgaaaaaaggtttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (39)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (8)   
   Pfam (8)   
All databases (57)   

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