KEGG   Marinomonas arctica: IBG28_18115
Entry
IBG28_18115       CDS       T06902                                 
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
  KO
K00970  poly(A) polymerase [EC:2.7.7.19]
Organism
mard  Marinomonas arctica
Pathway
mard03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mard00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    IBG28_18115 (pcnB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mard03019]
    IBG28_18115 (pcnB)
Enzymes [BR:mard01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.19  polynucleotide adenylyltransferase
     IBG28_18115 (pcnB)
Messenger RNA biogenesis [BR:mard03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     IBG28_18115 (pcnB)
SSDB
Motif
Pfam: PolyA_pol_arg_C PolyA_pol PolyA_pol_RNAbd
Other DBs
NCBI-ProteinID: QNT05548
UniProt: A0A7H1J4Y2
Position
3908620..3910053
AA seq 477 aa
MLTGLKSLVRKATSLFASPKAQTYPIVIPRSDHSLSRQDLSPNAVKVLYRLNKAGYDAYL
VGGCVRDHLIGIEPKDFDVVTNATPEQVHNIFSNSRLIGRRFKLVHVTFGREIIEVSTFR
ANSAQDDDDDDTPTTSLKGKDSARSAHGIVLRDNVYGSIEEDAERRDFTFNALYYNVQDF
SIHDFCGGLKDIELRQIRIIGDARQRYQEDPVRMLRAIRFAGKLGFEIEAETAAPIKEMA
HLLDHIPPARLFEEVLKLLGSGNGIETYHLLRQYGLFRYLFPDTDALLQSGWKRNDIDPE
AFILQGLKNTDDRIQSGKTTAPYFLYAVLLWPSVALRHEEFQAQGMPATPALHQAANMVL
DNQVASTAIPRRFSTPMREIWDMQYRLPKRYGKRAFLLLEHPRFRAGFDFLLIRELSGTE
LDGLGDWWEKFQHGTESQQRELIKSIDNFANDKEGPKKRRPRRRKKSNAPQRETFDE
NT seq 1434 nt   +upstreamnt  +downstreamnt
atgcttacaggattaaaatctctggtacgtaaagctacctcactgtttgcctctccaaag
gcacagacttaccctattgtcatacctcgtagcgatcacagcttatctcgacaagatttg
agccccaatgctgtcaaagtactatatcgcctaaataaagcgggctacgatgcttatctt
gttggcggctgtgttcgagatcatttgattggtatagaaccaaaagacttcgacgtggtc
actaacgccacaccagaacaagtacacaatattttctctaattccagactgatcggtcgc
cgctttaaactggtccatgtgacatttggccgagaaattattgaggtttccacctttaga
gcaaattcagcacaggatgacgatgacgacgatacaccaaccacgtcattgaaaggcaaa
gactccgctcgttcagctcatggtattgtgctacgtgacaacgtctacggcagtatcgaa
gaagacgctgagcgtcgtgacttcacctttaacgccttgtattacaatgtccaagacttc
agcattcacgacttctgtggcggtctaaaagacatcgaactcagacaaattcgaatcatc
ggcgatgcacgccaacgttatcaagaagaccctgttcgtatgctgcgcgcgattcgcttc
gctggcaaactaggctttgagatagaagccgaaaccgctgcgccaatcaaagaaatggca
cacctactggatcacattccgccggcgcgcttatttgaagaagtattaaagcttctaggc
agtggtaatggcattgaaacgtaccacctattacgtcaatacggtttatttcgttactta
tttcccgacactgacgccttactgcaaagcggctggaaacgtaatgacatcgatccagaa
gcctttatacttcaaggtctaaaaaataccgacgatcgaatccagagtggaaaaaccaca
gcgccatattttttatacgcggtactactgtggccgagcgtggcattgcgtcatgaagag
ttccaagcccaaggcatgccagccacaccggcattgcatcaagcggccaatatggtttta
gacaatcaagtcgcttctaccgccattccgcgtcgattctccacaccaatgcgtgaaatc
tgggatatgcaatatcgcctccctaaacgctacggcaaacgtgcctttttgctgcttgaa
cacccacgctttcgtgccggttttgactttttgttaatacgcgaattaagtggaacagag
ctagatggattgggcgattggtgggaaaaattccagcacggcacagaaagccaacaaaga
gagctgattaaaagcattgataactttgctaacgacaaagaaggccctaaaaaacgccgc
cctcgtcgtcgtaagaaaagtaacgcaccacaaagagaaacatttgacgagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (12)   

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