KEGG   Mariniflexile sp. TRM1-10: CJ739_3766
Entry
CJ739_3766        CDS       T05592                                 
Name
(GenBank) Ribosomal large subunit pseudouridine synthase A
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
marf  Mariniflexile sp. TRM1-10
Brite
KEGG Orthology (KO) [BR:marf00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:marf03009]
    CJ739_3766
   03016 Transfer RNA biogenesis [BR:marf03016]
    CJ739_3766
Enzymes [BR:marf01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     CJ739_3766
    5.4.99.29  23S rRNA pseudouridine746 synthase
     CJ739_3766
Ribosome biogenesis [BR:marf03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CJ739_3766
Transfer RNA biogenesis [BR:marf03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    CJ739_3766
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AXP82826
UniProt: A0A385BUU6
Position
complement(4532600..4534285)
AA seq 561 aa
MSHFRTSFFHPLENNLGINLPDKFTFPFYYEPHPLSVLAAKQLQNYLETQTDFTHNFGLN
PNQSGLIIGKMFGVMVVKNTEGTLGYLAAFSGKLADSNHLKGFVPTVYNTLNEAGFYKKG
ETQLNAINTQIEILEQAPAFKMAQTNVLNSKIAFTEALNVLKAEIKAEKQNRNQQREAGK
QSMSPEVYEKFIETLNQQSIGYQIRLKHLKKDGEQRIQEAESHLNSLKQPIKELKTKRAA
LSASLQKRIHEQYQFLNANGDTKDLLAIFKNTTSPIPPAGSGECAAPKLFQYAYENKLQP
IAMAEFWWGASPKSEVRKHQQFYPSCRSKCEPILGHMMQGLVVDDNPIEDQIIFNQALDI
VYEDAHLLLVNKPHEFLSVPGKNISESVLSRMQQYLPHATGPLLVHRLDMSTSGLLLVAK
SQRVYKHLQKQFIERSVKKRYVALLDGVLPNTEGTINLPLRVDLDNRPQQLVCYAHGKPA
TTNYQVIAAENGKTRIYFYPITGRTHQLRVHAAHSEGLKTPIVGDDLYGTKANRLHLHAE
RISFTHPITKEGLTVSCEVPF
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgtctcatttccgtacatcattttttcatcctttagaaaataatttgggcattaactta
cctgataaattcacctttccgttttattacgagccacatccgttaagtgtcttggcagca
aaacagcttcaaaactatttagagacccaaaccgattttacacacaacttcgggttgaat
cccaaccaaagcggactcataataggcaaaatgtttggcgttatggtggtgaaaaatacg
gagggcacattgggttatttggcagcgttttccggaaaattggcagatagcaaccatctt
aaagggtttgtgcctacagtttacaacaccttaaacgaagcaggtttttataaaaagggc
gaaacacaattaaatgccatcaatacacagattgagattttggaacaagctcccgcattt
aaaatggcacaaacaaacgttttaaatagtaaaatcgctttcacggaagcgttaaatgtg
cttaaagctgaaattaaagctgaaaagcaaaacagaaaccaacagcgtgaagcgggaaaa
caaagtatgtctccagaggtgtacgagaaatttatagaaactttaaaccagcaaagtatt
ggttatcaaatccggttaaaacatctaaaaaaggatggtgaacagcgcatacaagaagcg
gagtcacatttgaatagcttaaagcagcccattaaagagttgaaaaccaaacgtgctgct
ttatcggcatcgttgcaaaaacgcatccacgagcagtatcaattcttaaatgcaaacggc
gataccaaagatttactcgctatttttaaaaacaccacgtcacccataccacctgcaggt
tcgggggaatgtgccgcacccaaactgtttcaatatgcttacgaaaacaaattgcagccc
attgccatggcagagttttggtggggtgcctcgccaaagtccgaagtacggaaacaccaa
cagttttatccttcgtgccgtagcaagtgcgaacccattttgggtcatatgatgcaaggt
ttggtggttgatgataaccccattgaagaccagattatttttaaccaagcattggatatt
gtttatgaagacgcccatttgctactggtaaacaaaccccatgagtttttatcggtaccc
ggaaaaaatattagtgagtcggtattaagcagaatgcaacagtacttgccccatgctaca
ggtcctttgttggtgcaccggttggatatgtcaacttcggggttgttgttggtagccaaa
agtcaacgggtttacaagcatttgcaaaaacagtttatagaacgcagcgtaaaaaagcgt
tatgtggctttattagatggcgttttgcccaacaccgaaggcactataaacctaccgctc
cgagtggatttagataaccgcccacaacaattggtatgttacgcccacggcaaaccagca
accactaactatcaggttattgctgccgaaaacggtaaaacccgcatttatttttatccc
attacggggcgcacccaccagttacgcgtccatgccgcccatagcgaaggattgaaaaca
cctattgtgggagacgacctctacggtaccaaagccaaccgacttcatttacatgctgaa
cgcataagttttacgcatcctattactaaagaagggcttacggtaagttgtgaggtacct
ttttag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system