KEGG   Mycoplasmopsis arginini: MARG145_0473
Entry
MARG145_0473      CDS       T04176                                 
Symbol
uvrD
Name
(GenBank) ATP-dependent helicase
  KO
K03657  ATP-dependent DNA helicase UvrD/PcrA [EC:5.6.2.4]
Organism
marg  Mycoplasmopsis arginini
Pathway
marg03420  Nucleotide excision repair
marg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:marg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    MARG145_0473 (uvrD)
   03430 Mismatch repair
    MARG145_0473 (uvrD)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:marg03400]
    MARG145_0473 (uvrD)
Enzymes [BR:marg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     MARG145_0473 (uvrD)
DNA repair and recombination proteins [BR:marg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     MARG145_0473 (uvrD)
   MMR (mismatch excision repair)
    Other MMR factors
     MARG145_0473 (uvrD)
SSDB
Motif
Pfam: UvrD-helicase UvrD_C AAA_19 UvrD_C_2 Viral_helicase1 AAA_11 AAA_30 AAA_12 Exo70_N
Other DBs
NCBI-ProteinID: BAQ54475
Position
complement(394714..396927)
AA seq 737 aa
MVDLHKLNKQQREAVEHNEGPLRIIAGAGSGKTRVLTYKISYLVDELGINPSRILALTFS
NKAANEMKQRVVTMIDNPSKLPIISTFHAICAKILRKEIHLLGYENDFQILDEIDQRAIL
KSVYSELEITNNEFSYNSIISYIQNKKNSLFDFLNIENEQEDSSMSPEERKAIETKELIY
KHYQERLQRSKALDFDDLLVFVYTLFYDPKYENIANKWAKRFDYLLIDEFQDTSVIQYKI
LQKLCSTNNLTIVGDPDQTIYSWRNADINIIINFHKDYPDALTVKLEENYRSTKKILYHA
NKLIQKNKLRLEKKLFTENEEGEDVEFYCGHSEEAEAIWIAQKISELKRSRVQLKNIAIL
FRTNSYSRAIEESLIRENTIYKLFGSIKFYQREEVKDALAYLRVIHDGSEIALLRIINKP
SRKIGEVTIDKLLEFARSKNLDLYSAIERHFDELQETLSISTSTLQRLAYLINDIRWARA
ALKSNNISSTLKEFMFKKINYFEVFKGSEEEYEAKQENFLSLIAAIEQWEKNNTHGTIDE
YLQEITLITDRDVEDDATSFVSLMTVHNAKGLEFDYVFICGLAEGIFPLKRAITIAPNKD
FTFLSSSNTSEENIEGLEEERRLAYVAITRAKKKLFLSFAINRSGFAKRSRFITEAGIYE
QNRSISLANDFSIAEENHLNNSDLVVGDYIMHNFFGHGQIIDMVGSIITVKFANQKTIKQ
FEKSHHSIKKWDGSLDD
NT seq 2214 nt   +upstreamnt  +downstreamnt
atggtagacttacataaattaaataaacaacaaagagaagcagtggaacacaacgaaggc
cctcttcgtataattgctggtgctggttcaggaaaaacaagagttttaacttataaaatt
tcttatctagttgatgaattgggaattaatccttcacgtatattagccttaactttttct
aataaagcagctaatgaaatgaaacagagagtcgtaaccatgattgacaacccaagtaaa
ttaccaataataagcacctttcatgctatttgtgcaaagatattgagaaaagaaattcat
cttttaggttatgaaaatgattttcaaattcttgacgagatagatcaaagggcaatttta
aaatctgtttattctgaattagaaattaccaataatgaatttagctacaactcaattatt
tcatacattcaaaataagaaaaattctttatttgattttttaaatattgaaaatgagcaa
gaagatagctcaatgtctccagaagaaagaaaagcaatagaaactaaagaattaatttac
aaacactatcaagaaaggctccaaagatctaaggctttggatttcgatgatttattagtg
tttgtatatactttgttttatgatccaaaatatgaaaacattgctaacaaatgagcaaaa
agatttgattatttattaattgatgaattccaagacacaagcgttattcaatacaagatt
ttacaaaaattatgttcaactaataacttaacaattgttggagatcctgatcaaacaatt
tatagttgaagaaatgccgatattaatatcattataaatttccataaagattatcctgat
gcacttacagtaaaacttgaagaaaattatcgttcaactaaaaaaattctatatcacgct
aataaactaatccaaaaaaacaaacttagattagaaaaaaaattatttactgaaaacgaa
gaaggtgaagacgttgaattttattgtggtcacagcgaagaagcagaagcaatttgaata
gcccaaaaaatttctgaactgaaaagatctcgtgttcaactaaaaaatattgcgatcttg
tttagaactaatagctactcaagagcaattgaagaatccttaattagagaaaatacaatt
tataagttgtttggttctatcaaattttatcaaagagaagaagtcaaagacgctttagct
tatttaagggtaattcacgatggtagtgaaattgctttattaagaatcattaacaaaccc
tcacgtaagattggagaagttacaattgataaacttttagaatttgcaagaagtaaaaat
ctagatttatattctgctatcgaaaggcattttgatgaattacaagaaacattgagtatt
tctacatcaaccttacaaagattggcttatttaattaacgatatacgttgagcaagagca
gctttaaaatcaaataatattagcagtactttaaaagaatttatgtttaaaaagatcaac
tattttgaagtctttaagggttcagaagaagaatatgaagctaaacaagaaaacttttta
agtttaattgcagcaatagaacaatgagaaaaaaataatactcacggtactattgatgaa
tacttgcaagaaattacactaattacagaccgcgatgttgaagatgatgcaacaagtttt
gtatcattaatgacagtacataacgcaaagggccttgagtttgattatgtatttatttgt
ggtttagccgaaggcatatttccgcttaagagagcaataacaattgctcctaataaagat
tttactttcttaagtagttcgaatacgagtgaagaaaatattgagggattagaggaagaa
agaagacttgcttatgtagcaattactcgcgcaaagaaaaaactgtttttatcttttgca
attaatagatcaggctttgctaaaagaagtagatttataactgaagcaggtatttatgaa
caaaacagaagtattagcttagcaaatgatttttcaatagctgaagaaaaccacttaaac
aatagtgatttagttgttggagattacattatgcacaatttttttggtcatggtcaaata
attgatatggtagggtcaattattactgttaaatttgctaatcaaaaaacaataaagcaa
tttgaaaaatcgcatcactcaattaagaaatgagatggtagtctagatgattaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (19)   

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