KEGG   Marinobacter sp. JH2: MARI_03900
Entry
MARI_03900        CDS       T06162                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
marj  Marinobacter sp. JH2
Pathway
marj02020  Two-component system
marj02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:marj00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MARI_03900 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    MARI_03900 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:marj03021]
    MARI_03900 (rpoN)
Transcription machinery [BR:marj03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MARI_03900 (rpoN)
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID
Other DBs
NCBI-ProteinID: QBM16310
UniProt: A0A4P6W7M0
Position
complement(398251..399789)
AA seq 512 aa
MVMKASLQLKMGQSLTMTPQLQQAIRLLQLSTLDLQQEIQQALDSNPMLETSEDDDQADS
TDQQENGHEEQHETATAQEESAAEPPSSDWDESETAPDWSAEDQTPDNIPDDLPVDTAWD
DIYQSAPAPASRGDDENDSDFETRNSPSETLHDHLEWQLNLTPLSERDQAIAHALLDAVD
DRGYLTSSIEEIHSGLFESSEEDPLELDEVQAVLRRLQHFDPPGVFARDLQDCLLIQLSQ
LPPDTLWLRQAKLVVTQFLHLLGNRDYAQLLRRSRLKEDQLKEVLGLITSLNPTPGDSVD
RTEPDYVIPDVIVRKHEGRWRVELNPEIAPRIRVNASYASLIRRADSSADNTYMRDQLQE
AKWFIKSLQSRNETLLKVATRIVEYQQGFLDHGDEAMKPLILSDIAQAVDMHESTISRVT
TQKYMHTPRGIFELKYFFSSHVGTAEGGECSSTAIRAMIKKLIADETPKKPLSDSKIAAM
LGEQGINVARRTVAKYREAMHIPPSNERKRLV
NT seq 1539 nt   +upstreamnt  +downstreamnt
atggttatgaaagcctcattacagcttaaaatgggccaaagcctaaccatgacaccccag
ctgcaacaagccattcggctattgcagctttccacgctggatctacagcaggaaatccag
caagcactcgattcaaaccccatgctggaaacctccgaggacgacgatcaggcggattcc
accgatcagcaagaaaacggccacgaagagcagcacgaaaccgcaacagctcaggaagag
tcggctgccgagccgccaagttcggattgggacgaatcagaaaccgcacccgactggtcc
gcggaagatcaaacacccgataacatccccgacgatctgccggttgataccgcttgggat
gacatttaccagtcggcaccggctcctgccagccgtggcgacgatgaaaacgattctgac
ttcgaaacccggaactcaccgagcgagaccctgcacgatcatctggaatggcagctgaac
ctgactccgctcagcgaacgggatcaagcgatcgcccatgccttgttggacgccgttgat
gaccgggggtatttaacgtcttccatcgaagagatccactccggcttatttgaaagctca
gaagaagatccgctggaactcgacgaggttcaggcggttctgcgccggctccagcatttt
gatccgcccggtgtgtttgcacgagacctgcaagactgcctactgatccaacttagccaa
ctgccaccagacacgctttggcttcgccaagccaagctcgtggtcacccagttcctgcat
ttgttaggcaaccgtgactacgctcagttgcttcgccgcagccgcctgaaagaagatcaa
ctgaaagaagtgttggggctgatcaccagcctgaacccaacgccgggtgacagcgtcgat
cgcacagaaccggactatgtcatcccggatgtcatcgtacgcaaacacgaaggccgatgg
cgcgtcgaactcaacccggaaattgccccgcgcattcgcgtaaacgcgagctatgcttca
ctcatacgtcgggcagatagcagcgcagacaacacctacatgcgtgaccagttgcaagag
gccaagtggtttattaaaagcctccagagccggaacgaaaccttgctcaaagtggccact
cgcattgtggaataccagcagggttttctggatcatggtgacgaagccatgaagccgctc
attctgtcggacatcgcccaagcggtcgatatgcacgagtcgaccatctcgcgggttacc
acgcaaaaatacatgcatacaccacggggtatttttgaactcaaatactttttctccagc
cacgtgggcacggccgagggtggagaatgttcctcaacggcgattcgtgcgatgatcaaa
aaactgattgcggacgaaactccaaaaaagccattgagtgatagcaaaattgcagccatg
ctaggagaacagggaatcaatgttgcccgacgtacggtagccaagtacagggaggcgatg
catatcccaccctcgaacgagcgtaagcgtttggtttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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