KEGG   Marinitoga sp. 1137: LN42_10030
Entry
LN42_10030        CDS       T04633                                 
Name
(GenBank) ribonuclease R
  KO
K12573  ribonuclease R [EC:3.1.13.1]
Organism
marn  Marinitoga sp. 1137
Pathway
marn03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:marn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LN42_10030
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:marn03019]
    LN42_10030
   03016 Transfer RNA biogenesis [BR:marn03016]
    LN42_10030
Enzymes [BR:marn01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.1  exoribonuclease II
     LN42_10030
Messenger RNA biogenesis [BR:marn03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LN42_10030
Transfer RNA biogenesis [BR:marn03016]
 Prokaryotic type
  tRNA degradation factors
   LN42_10030
SSDB
Motif
Pfam: RNB CSD2 OB_RNB S1 CSD G-gamma
Other DBs
NCBI-ProteinID: APT76678
Position
2033595..2035799
AA seq 734 aa
MVKNIQKKVIQLIEKKPLLQKEIYNKLKAKTKEERKKVRDALKEMMDNGEIYKNSKNKYC
LPGKNMKIGIIEFTRRGSMAFVTIKGGEEIAITLENAKDAMHKDTVLVEIIGTWRDLPKG
KVVRVLKRGMKKVVGIFEKKKLFGFIIPIDQKINTDFYVAPENFNDAKPGQVVEAEIIKY
GGKNPEVKITKIIGDTNDPKVDLPIVIIKHELPEPGVFPKNVMNEALKIPNTVQDKDLKG
RKDFRDEIIFTIDGDTAKDFDDAVQIKKLDNGNYLLGVHIADVSHYVKENSNLDKEAFKR
GTSVYLIDTVIPMLPHELSDWICSLVENEDRLTMSLLMEIDENGDVVDFNVYNGVIRSKK
RLTYSKVNKLLSNEADEELEKEIGWLRPQLEMMKELMEIIRENRRRRGAILDIEGGEVKF
IFDENGNVKDIIPIERGISEVIIEEFMIKANETIASIFDSQGLPFIYRIHEEPDPDMLLQ
LKNYLEIIGLRYRFPKNIHPKLLQDLLEHLKDHPLKKSIQKLLVRSLKRAVYSDLNVGHF
GLASENYTHFTSPIRRYPDLIVHRLLKKYLKGKGTLSKKDIEKYTEKLPEIASHSSKRER
VANEAEWDLADMKKVEYILDHMNEIFEVYITNVTKFGLFVEIPDKFIQGLVHVSSMDDYY
VYNEKLNVLVGDRKKKVYKLGDKIKVRVKNANKLTAEIDFEIVDKTDEEMEKELKGKYPN
AKIKVKRKKKKNKK
NT seq 2205 nt   +upstreamnt  +downstreamnt
atggtaaaaaatatacaaaaaaaagttatacagttaattgaaaaaaagccattactacaa
aaagaaatatataataaattaaaggctaaaacaaaggaagaaagaaaaaaggtaagagat
gcgttaaaagaaatgatggataacggagaaatctacaaaaattctaaaaacaaatattgt
ttaccaggaaaaaatatgaaaataggaattatagaatttacaagaagaggaagtatggca
tttgtaaccataaaaggtggagaagaaatagccataactcttgaaaatgctaaagatgca
atgcataaagatacagtgttggtagaaataattggaacatggcgagacttgccaaaagga
aaagttgtaagagtattaaaaagaggaatgaaaaaggttgtaggaatatttgaaaagaaa
aaattatttggttttattattcctatagatcaaaaaataaacacagatttttatgtagct
cctgaaaactttaatgatgctaaaccaggacaggttgtagaagctgaaataataaaatat
ggtggtaaaaatcctgaggtaaagataacaaaaataataggtgacacaaatgatccaaaa
gtagatttaccaatagttattataaaacatgagcttcctgagcctggagtatttccaaaa
aatgtaatgaatgaagctttaaagataccaaatacagtacaggataaggatttaaaaggt
agaaaagattttagagatgaaattatctttacaatagatggagatactgcaaaagacttt
gatgatgcagttcaaataaagaaattagataatggaaattatttattaggtgttcatatt
gctgatgtttctcattatgtaaaggaaaattccaaccttgacaaagaagcatttaaaaga
ggaacaagtgtttatttaatagatactgtaattccaatgttgcctcatgagctttcagat
tggatatgttctcttgttgaaaatgaagatagactcaccatgtcattgcttatggaaata
gatgaaaatggtgatgttgtagattttaatgtatataacggagttatcaggagtaaaaaa
aggcttacatatagcaaagtaaataaactattatcaaatgaagcagatgaggaacttgaa
aaggaaataggctggttgagaccacaattagaaatgatgaaagaattaatggagataatc
agggaaaacaggagaagaagaggagctattcttgatattgaaggtggagaagtaaaattt
atatttgatgaaaatggcaacgtaaaggatataattcctattgaaagaggcatttcagaa
gtaataattgaagaatttatgattaaagctaatgaaactatagcctctatatttgattcg
cagggattgccgtttatatatagaattcacgaagaacctgatccggatatgcttttacaa
ctaaaaaattatcttgaaattataggtttgagatacagatttccaaagaatatacatcca
aaattattacaggatttattggaacatcttaaagatcatccattgaaaaaaagtatacag
aaattattggttcgctctttaaaaagagcagtatattcagatttaaatgtaggacacttt
ggtcttgcatctgaaaattatacgcattttacatcaccaataagaagatatcctgatttg
attgtacatagattattgaaaaaatatctaaaaggaaaaggaacgctttcaaaaaaagat
atagagaaatatacagaaaagcttcctgaaatagcttctcacagttcaaaaagagaaaga
gtagcaaatgaagcggaatgggatcttgcggatatgaaaaaggtagagtatattttagac
catatgaatgaaatctttgaagtatacataactaatgtaaccaaatttggtttgtttgtg
gaaataccggataaatttatacagggtcttgttcatgtatcctctatggatgattattat
gtttataatgaaaaattaaatgttcttgttggagatagaaaaaagaaagtttataaatta
ggagataaaataaaggtaagggtaaaaaatgcaaataaattaacagcggaaatagatttt
gaaatagttgataaaacagatgaagaaatggaaaaagaattaaaagggaaatatccaaat
gcaaagataaaagtaaaaagaaaaaagaagaaaaataaaaagtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (6)   
   Pfam (6)   
All databases (16)   

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